RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 CENPJQ9HC77 1338 aaPredicted RBP6.39□□□□□ -1.39
LINC01239-202ENST00000436786 LRP5O75197 1615 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 NUBP1P53384 320 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 PLCD3Q8N3E9 789 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 DISP2A7MBM2 1401 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 RGPD1P0DJD0 1748 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 CPDO75976 1380 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 NRKQ7Z2Y5 1582 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 APBA3O96018 575 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 GCP02774 474 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 PDE3BQ13370 1112 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 NLRP13Q86W25 1043 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 PROM2Q8N271 834 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 TCP11L2Q8N4U5 519 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 CABP1Q9NZU7 370 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 TNS1Q9HBL0 1735 aaKnown RBP6.38□□□□□ -1.39
LINC01239-202ENST00000436786 ZBTB7CA1YPR0 619 aa6.38□□□□□ -1.39
LINC01239-202ENST00000436786 L3MBTL2Q969R5 705 aa6.37□□□□□ -1.39
LINC01239-202ENST00000436786 NLRP6P59044 892 aa6.37□□□□□ -1.39
LINC01239-202ENST00000436786 LMO7Q8WWI1 1683 aa6.37□□□□□ -1.39
LINC01239-202ENST00000436786 COL5A2P05997 1499 aaPredicted RBP6.36□□□□□ -1.39
LINC01239-202ENST00000436786 LSM11P83369 360 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC01239-202ENST00000436786 SIN3AQ96ST3 1273 aa6.36□□□□□ -1.39
LINC01239-202ENST00000436786 THRAP3Q9Y2W1 955 aaKnown RBP6.36□□□□□ -1.39
LINC01239-202ENST00000436786 USP6P35125 1406 aa6.36□□□□□ -1.39
LINC01239-202ENST00000436786 BRD4O60885 1362 aaPredicted RBP6.36□□□□□ -1.39
LINC01239-202ENST00000436786 PARD3Q8TEW0 1356 aa6.36□□□□□ -1.39
LINC01239-202ENST00000436786 EVC2Q86UK5 1308 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 AATKQ6ZMQ8 1374 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 PBX2P40425 430 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 BOLA1Q9Y3E2 137 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 CRB1P82279 1406 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 QRICH2Q9H0J4 1663 aa6.35□□□□□ -1.39
LINC01239-202ENST00000436786 NEUROD1Q13562 356 aa6.34□□□□□ -1.39
LINC01239-202ENST00000436786 AXIN2Q9Y2T1 843 aa6.34□□□□□ -1.39
LINC01239-202ENST00000436786 SLIT3O75094 1523 aa6.34□□□□□ -1.39
LINC01239-202ENST00000436786 NBPF14Q5TI25 921 aa6.34□□□□□ -1.39
LINC01239-202ENST00000436786 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
LINC01239-202ENST00000436786 ZNF467Q7Z7K2 595 aaPredicted RBP6.34□□□□□ -1.39
LINC01239-202ENST00000436786 DDB1Q16531 1140 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 PTF1AQ7RTS3 328 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 TTC21BQ7Z4L5 1316 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 SOX12O15370 315 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 ARHGEF25Q86VW2 580 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 PIK3C2AO00443 1686 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 PARP4Q9UKK3 1724 aaKnown RBP6.33□□□□□ -1.4
LINC01239-202ENST00000436786 WDR17Q8IZU2 1322 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 ROCK2O75116 1388 aaKnown RBP6.33□□□□□ -1.4
LINC01239-202ENST00000436786 TRPM1Q7Z4N2 1603 aa6.33□□□□□ -1.4
LINC01239-202ENST00000436786 RREB1Q92766 1687 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 NUP188Q5SRE5 1749 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 C11orf95C9JLR9 678 aaPredicted RBP6.32□□□□□ -1.4
LINC01239-202ENST00000436786 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
LINC01239-202ENST00000436786 OVOS2A0A0G2JMS6 1433 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 OVOS2A0A0J9YW53 1432 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 CPSF1Q10570 1443 aaKnown RBP6.32□□□□□ -1.4
LINC01239-202ENST00000436786 OVOS2Q6IE36 1432 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 PEAK1Q9H792 1746 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 COL18A1P39060 1754 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 KCNH5Q8NCM2 988 aa6.32□□□□□ -1.4
LINC01239-202ENST00000436786 BCL11BQ9C0K0 894 aaPredicted RBP6.32□□□□□ -1.4
LINC01239-202ENST00000436786 LRRC37A3O60309 1634 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 PLSCR1O15162 318 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 CSB-PGBD3P0DP91 1061 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
LINC01239-202ENST00000436786 CARD10Q9BWT7 1032 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 TTC21AQ8NDW8 1320 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 KTN1Q86UP2 1357 aaKnown RBP6.31□□□□□ -1.4
LINC01239-202ENST00000436786 KCNQ2O43526 872 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 SPON1Q9HCB6 807 aa6.31□□□□□ -1.4
LINC01239-202ENST00000436786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC01239-202ENST00000436786 EXOC5O00471 708 aa6.3□□□□□ -1.4
LINC01239-202ENST00000436786 IFFO2Q5TF58 517 aa6.3□□□□□ -1.4
LINC01239-202ENST00000436786 NME9Q86XW9 330 aa6.3□□□□□ -1.4
LINC01239-202ENST00000436786 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
LINC01239-202ENST00000436786 ANO8Q9HCE9 1232 aaPredicted RBP6.3□□□□□ -1.4
LINC01239-202ENST00000436786 PPP1R1BQ9UD71 204 aaPredicted RBP6.3□□□□□ -1.4
LINC01239-202ENST00000436786 NFAT5O94916 1531 aa6.3□□□□□ -1.4
LINC01239-202ENST00000436786 AKAP12Q02952 1782 aa6.29□□□□□ -1.4
LINC01239-202ENST00000436786 BCL9O00512 1426 aa6.29□□□□□ -1.4
LINC01239-202ENST00000436786 PCDHB8Q9UN66 801 aa6.29□□□□□ -1.4
LINC01239-202ENST00000436786 USP31Q70CQ4 1352 aa6.29□□□□□ -1.4
LINC01239-202ENST00000436786 TMC1Q8TDI8 760 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 CARD11Q9BXL7 1154 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 SLC12A5Q9H2X9 1139 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 CD163L1Q9NR16 1453 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 CCDC7Q96M83 1385 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 SBF2Q86WG5 1849 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 WNK3Q9BYP7 1800 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 TXNRD1Q16881 649 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 NLRP2Q9NX02 1062 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 RGPD5Q99666 1765 aa6.28□□□□□ -1.4
LINC01239-202ENST00000436786 ZBTB7AO95365 584 aa6.27□□□□□ -1.41
LINC01239-202ENST00000436786 HDGFL2Q7Z4V5 671 aaPredicted RBP6.27□□□□□ -1.41
LINC01239-202ENST00000436786 RGPD3A6NKT7 1758 aaPredicted RBP6.27□□□□□ -1.41
LINC01239-202ENST00000436786 RGPD4Q7Z3J3 1758 aa6.27□□□□□ -1.41
LINC01239-202ENST00000436786 YY1P25490 414 aa6.27□□□□□ -1.41
LINC01239-202ENST00000436786 ANKRD24Q8TF21 1146 aa6.27□□□□□ -1.41
LINC01239-202ENST00000436786 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms