RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 IL2RBP14784 551 aa30.67■■■□□ 2.5
SMARCAL1-208ENST00000434435 ZNF772Q68DY9 489 aaPredicted RBP30.66■■■□□ 2.5
SMARCAL1-208ENST00000434435 PHACTR3Q96KR7 559 aa30.66■■■□□ 2.5
SMARCAL1-208ENST00000434435 LRRC37A3O60309 1634 aa30.65■■■□□ 2.5
SMARCAL1-208ENST00000434435 APAF1O14727 1248 aa30.64■■■□□ 2.5
SMARCAL1-208ENST00000434435 THSD7AQ9UPZ6 1657 aa30.63■■■□□ 2.49
SMARCAL1-208ENST00000434435 PLEKHO1Q53GL0 409 aaPredicted RBP30.63■■■□□ 2.49
SMARCAL1-208ENST00000434435 BARGINQ6ZT62 677 aa30.63■■■□□ 2.49
SMARCAL1-208ENST00000434435 CDCA7Q9BWT1 371 aaPredicted RBP30.63■■■□□ 2.49
SMARCAL1-208ENST00000434435 HNRNPUQ00839 825 aaKnown RBP eCLIP30.62■■■□□ 2.49
SMARCAL1-208ENST00000434435 AMOTQ4VCS5 1084 aa30.62■■■□□ 2.49
SMARCAL1-208ENST00000434435 GAS2L2Q8NHY3 880 aa30.62■■■□□ 2.49
SMARCAL1-208ENST00000434435 NFE2L2Q16236 605 aa30.61■■■□□ 2.49
SMARCAL1-208ENST00000434435 GJD4Q96KN9 370 aaPredicted RBP30.61■■■□□ 2.49
SMARCAL1-208ENST00000434435 QTRT2Q9H974 415 aaKnown RBP30.61■■■□□ 2.49
SMARCAL1-208ENST00000434435 TMPOP42166 694 aaKnown RBP30.6■■■□□ 2.49
SMARCAL1-208ENST00000434435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.6■■■□□ 2.492e-6■□□□□ 9.5
SMARCAL1-208ENST00000434435 MTHFSDQ2M296 383 aaKnown RBP30.59■■■□□ 2.49
SMARCAL1-208ENST00000434435 YTHDC1Q96MU7 727 aaKnown RBP30.59■■■□□ 2.49
SMARCAL1-208ENST00000434435 SPG7Q9UQ90 795 aa30.59■■■□□ 2.49
SMARCAL1-208ENST00000434435 PHF23Q9BUL5 403 aaPredicted RBP30.58■■■□□ 2.49
SMARCAL1-208ENST00000434435 TNS2Q63HR2 1409 aa30.57■■■□□ 2.48
SMARCAL1-208ENST00000434435 NGEFQ8N5V2 710 aa30.57■■■□□ 2.48
SMARCAL1-208ENST00000434435 RRP7AQ9Y3A4 280 aaKnown RBP30.57■■■□□ 2.48
SMARCAL1-208ENST00000434435 SENP3-EIF4A1A0A087X0R7 540 aa30.56■■■□□ 2.48
SMARCAL1-208ENST00000434435 FAM98CQ17RN3 349 aaKnown RBP30.56■■■□□ 2.48
SMARCAL1-208ENST00000434435 ZNF530Q6P9A1 599 aaPredicted RBP30.56■■■□□ 2.48
SMARCAL1-208ENST00000434435 NEUROD2Q15784 382 aa30.55■■■□□ 2.48
SMARCAL1-208ENST00000434435 ZCRB1Q8TBF4 217 aaKnown RBP30.55■■■□□ 2.48
SMARCAL1-208ENST00000434435 SCN11AQ9UI33 1791 aa30.54■■■□□ 2.48
SMARCAL1-208ENST00000434435 RIPK4P57078 832 aa30.54■■■□□ 2.48
SMARCAL1-208ENST00000434435 MAP3K5Q99683 1374 aa30.54■■■□□ 2.48
SMARCAL1-208ENST00000434435 PCDH11XQ9BZA7 1347 aa30.53■■■□□ 2.48
SMARCAL1-208ENST00000434435 PCDH11YQ9BZA8 1340 aa30.53■■■□□ 2.48
SMARCAL1-208ENST00000434435 NCBP3Q53F19 620 aaKnown RBP30.53■■■□□ 2.48
SMARCAL1-208ENST00000434435 LMOD3Q0VAK6 560 aa30.52■■■□□ 2.48
SMARCAL1-208ENST00000434435 C1orf141Q5JVX7 400 aa30.52■■■□□ 2.48
SMARCAL1-208ENST00000434435 SALL2Q9Y467 1007 aaPredicted RBP30.52■■■□□ 2.48
SMARCAL1-208ENST00000434435 ADAMTS7Q9UKP4 1686 aa30.51■■■□□ 2.47
SMARCAL1-208ENST00000434435 EXOC5O00471 708 aa30.5■■■□□ 2.47
SMARCAL1-208ENST00000434435 AKAP4Q5JQC9 854 aa30.5■■■□□ 2.47
SMARCAL1-208ENST00000434435 A0A0G2JS52 829 aa30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 RBM6P78332 1123 aaKnown RBP30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 MYT1Q01538 1121 aa30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 DDB1Q16531 1140 aa30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 CCDC27Q2M243 656 aa30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 BRWD3Q6RI45 1802 aa30.49■■■□□ 2.47
SMARCAL1-208ENST00000434435 ZBED9Q6R2W3 1325 aa30.48■■■□□ 2.47
SMARCAL1-208ENST00000434435 GNAT3A8MTJ3 354 aa30.48■■■□□ 2.47
SMARCAL1-208ENST00000434435 IFNL2Q8IZJ0 200 aa30.48■■■□□ 2.47
SMARCAL1-208ENST00000434435 RGS17Q9UGC6 210 aaPredicted RBP30.48■■■□□ 2.47
SMARCAL1-208ENST00000434435 PHKG2P15735 406 aa30.46■■■□□ 2.47
SMARCAL1-208ENST00000434435 RTF1Q92541 710 aaKnown RBP30.46■■■□□ 2.47
SMARCAL1-208ENST00000434435 TRIM35Q9UPQ4 493 aa30.46■■■□□ 2.47
SMARCAL1-208ENST00000434435 CYP27B1O15528 508 aa30.45■■■□□ 2.47
SMARCAL1-208ENST00000434435 HTATSF1O43719 755 aaKnown RBP30.45■■■□□ 2.47
SMARCAL1-208ENST00000434435 ONECUT3O60422 494 aaPredicted RBP30.45■■■□□ 2.47
SMARCAL1-208ENST00000434435 HSP90AB1P08238 724 aaKnown RBP30.43■■■□□ 2.46
SMARCAL1-208ENST00000434435 WWC1Q8IX03 1113 aa30.43■■■□□ 2.46
SMARCAL1-208ENST00000434435 DDX54Q8TDD1 881 aaKnown RBP30.43■■■□□ 2.46
SMARCAL1-208ENST00000434435 TOGARAM1Q9Y4F4 1720 aa30.43■■■□□ 2.46
SMARCAL1-208ENST00000434435 SIPA1L3O60292 1781 aaPredicted RBP30.43■■■□□ 2.46
SMARCAL1-208ENST00000434435 DOT1LQ8TEK3 1739 aa30.42■■■□□ 2.46
SMARCAL1-208ENST00000434435 RXRBP28702 533 aa30.41■■■□□ 2.46
SMARCAL1-208ENST00000434435 SEPT12Q8IYM1 358 aa30.41■■■□□ 2.46
SMARCAL1-208ENST00000434435 KAT6BQ8WYB5 2073 aa30.41■■■□□ 2.46
SMARCAL1-208ENST00000434435 ZNF521Q96K83 1311 aa30.41■■■□□ 2.46
SMARCAL1-208ENST00000434435 POTEAQ6S8J7 498 aa30.4■■■□□ 2.46
SMARCAL1-208ENST00000434435 ITGB4P16144 1822 aa30.4■■■□□ 2.46
SMARCAL1-208ENST00000434435 KDM6AO15550 1401 aaPredicted RBP30.39■■■□□ 2.46
SMARCAL1-208ENST00000434435 DCTN1Q14203 1278 aa30.38■■■□□ 2.45
SMARCAL1-208ENST00000434435 MCM10Q7L590 875 aa30.38■■■□□ 2.45
SMARCAL1-208ENST00000434435 CALD1Q05682 793 aaKnown RBP30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 PDE3BQ13370 1112 aa30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 NKX1-1Q15270 411 aaPredicted RBP30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 MPRIPQ6WCQ1 1025 aa30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 DCAF5Q96JK2 942 aa30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 CEMIPQ8WUJ3 1361 aa30.37■■■□□ 2.45
SMARCAL1-208ENST00000434435 RNMTO43148 476 aaKnown RBP30.36■■■□□ 2.45
SMARCAL1-208ENST00000434435 WDR63Q8IWG1 891 aa30.36■■■□□ 2.45
SMARCAL1-208ENST00000434435 THUMPD2Q9BTF0 503 aaKnown RBP30.36■■■□□ 2.45
SMARCAL1-208ENST00000434435 MRC1P22897 1456 aa30.36■■■□□ 2.45
SMARCAL1-208ENST00000434435 IL17REQ8NFR9 667 aa30.35■■■□□ 2.45
SMARCAL1-208ENST00000434435 RGS12O14924 1447 aa30.34■■■□□ 2.45
SMARCAL1-208ENST00000434435 MARCH10Q8NA82 808 aaPredicted RBP30.34■■■□□ 2.45
SMARCAL1-208ENST00000434435 LGR6Q9HBX8 967 aa30.33■■■□□ 2.45
SMARCAL1-208ENST00000434435 SBF2Q86WG5 1849 aa30.33■■■□□ 2.45
SMARCAL1-208ENST00000434435 GOLGA2Q08379 1002 aa30.32■■■□□ 2.44
SMARCAL1-208ENST00000434435 IL16Q14005 1332 aa30.31■■■□□ 2.44
SMARCAL1-208ENST00000434435 KDM3BQ7LBC6 1761 aa30.31■■■□□ 2.44
SMARCAL1-208ENST00000434435 TEFQ10587 303 aa30.3■■■□□ 2.44
SMARCAL1-208ENST00000434435 NHSQ6T4R5 1651 aa30.27■■■□□ 2.44
SMARCAL1-208ENST00000434435 ERVV-2B6SEH9 535 aa30.27■■■□□ 2.44
SMARCAL1-208ENST00000434435 KRT27Q7Z3Y8 459 aa30.26■■■□□ 2.43
SMARCAL1-208ENST00000434435 PAPPAQ13219 1627 aa30.25■■■□□ 2.43
SMARCAL1-208ENST00000434435 BCL9O00512 1426 aa30.25■■■□□ 2.43
SMARCAL1-208ENST00000434435 E9PSI1 815 aa30.25■■■□□ 2.43
SMARCAL1-208ENST00000434435 GNAI1P63096 354 aa30.25■■■□□ 2.43
SMARCAL1-208ENST00000434435 SLC52A2Q9HAB3 445 aa30.25■■■□□ 2.43
SMARCAL1-208ENST00000434435 IFT57Q9NWB7 429 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms