RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 GNAI1P63096 354 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
CTCFL-209ENST00000433949 IPO9Q96P70 1041 aaKnown RBP15.25■□□□□ 0.03
CTCFL-209ENST00000433949 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
CTCFL-209ENST00000433949 HSPA1LP34931 641 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
CTCFL-209ENST00000433949 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 PHACTR3Q96KR7 559 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
CTCFL-209ENST00000433949 SLIT3O75094 1523 aa15.24■□□□□ 0.03
CTCFL-209ENST00000433949 PHLPP1O60346 1717 aa15.24■□□□□ 0.03
CTCFL-209ENST00000433949 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
CTCFL-209ENST00000433949 AHDC1Q5TGY3 1603 aaPredicted RBP15.24■□□□□ 0.03
CTCFL-209ENST00000433949 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
CTCFL-209ENST00000433949 EYA1Q99502 592 aa15.24■□□□□ 0.03
CTCFL-209ENST00000433949 RLBP1P12271 317 aa15.23■□□□□ 0.03
CTCFL-209ENST00000433949 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
CTCFL-209ENST00000433949 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
CTCFL-209ENST00000433949 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
CTCFL-209ENST00000433949 LTN1O94822 1766 aa15.22■□□□□ 0.03
CTCFL-209ENST00000433949 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
CTCFL-209ENST00000433949 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
CTCFL-209ENST00000433949 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
CTCFL-209ENST00000433949 NOP58Q9Y2X3 529 aaKnown RBP15.22■□□□□ 0.03
CTCFL-209ENST00000433949 IGHDP01880 384 aa15.21■□□□□ 0.03
CTCFL-209ENST00000433949 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
CTCFL-209ENST00000433949 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
CTCFL-209ENST00000433949 TRIM27P14373 513 aa15.21■□□□□ 0.03
CTCFL-209ENST00000433949 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
CTCFL-209ENST00000433949 STRN4Q9NRL3 753 aa15.21■□□□□ 0.03
CTCFL-209ENST00000433949 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
CTCFL-209ENST00000433949 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
CTCFL-209ENST00000433949 KIF24Q5T7B8 1368 aa15.2■□□□□ 0.02
CTCFL-209ENST00000433949 COL16A1Q07092 1604 aaPredicted RBP15.2■□□□□ 0.02
CTCFL-209ENST00000433949 NLRP2Q9NX02 1062 aa15.2■□□□□ 0.02
CTCFL-209ENST00000433949 PHRF1Q9P1Y6 1649 aaKnown RBP15.2■□□□□ 0.02
CTCFL-209ENST00000433949 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
CTCFL-209ENST00000433949 EVA1CP58658 441 aa15.18■□□□□ 0.02
CTCFL-209ENST00000433949 CHMP4BQ9H444 224 aaKnown RBP15.18■□□□□ 0.02
CTCFL-209ENST00000433949 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
CTCFL-209ENST00000433949 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CTCFL-209ENST00000433949 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
CTCFL-209ENST00000433949 ERBB3P21860 1342 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 RGS3P49796 1198 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 TNNQ9UQP3 1299 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
CTCFL-209ENST00000433949 PCDHB15Q9Y5E8 787 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 CPDO75976 1380 aa15.17■□□□□ 0.02
CTCFL-209ENST00000433949 VAMP4O75379 141 aa15.16■□□□□ 0.02
CTCFL-209ENST00000433949 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
CTCFL-209ENST00000433949 CRYBG1Q9Y4K1 1723 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 C8orf34Q49A92 452 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 ITPRIPQ8IWB1 547 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 KDRP35968 1356 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 RGPD5Q99666 1765 aa15.15■□□□□ 0.02
CTCFL-209ENST00000433949 JCADQ9P266 1359 aa15.14■□□□□ 0.01
CTCFL-209ENST00000433949 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-209ENST00000433949 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
CTCFL-209ENST00000433949 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
CTCFL-209ENST00000433949 C8orf37Q96NL8 207 aa15.14■□□□□ 0.01
CTCFL-209ENST00000433949 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
CTCFL-209ENST00000433949 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-209ENST00000433949 CAMTA1Q9Y6Y1 1673 aa15.13■□□□□ 0.01
CTCFL-209ENST00000433949 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
CTCFL-209ENST00000433949 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
CTCFL-209ENST00000433949 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
CTCFL-209ENST00000433949 NGLY1Q96IV0 654 aa15.12■□□□□ 0.01
CTCFL-209ENST00000433949 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
CTCFL-209ENST00000433949 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
CTCFL-209ENST00000433949 RGPD2P0DJD1 1756 aa15.1■□□□□ 0.01
CTCFL-209ENST00000433949 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
CTCFL-209ENST00000433949 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
CTCFL-209ENST00000433949 COL18A1P39060 1754 aa15.1■□□□□ 0.01
CTCFL-209ENST00000433949 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
CTCFL-209ENST00000433949 CHL1O00533 1208 aa15.09■□□□□ 0.01
CTCFL-209ENST00000433949 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
CTCFL-209ENST00000433949 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
CTCFL-209ENST00000433949 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-209ENST00000433949 API5Q9BZZ5 524 aaKnown RBP15.09■□□□□ 0.01
CTCFL-209ENST00000433949 PDZRN3Q9UPQ7 1066 aa15.09■□□□□ 0.01
CTCFL-209ENST00000433949 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
CTCFL-209ENST00000433949 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-209ENST00000433949 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0
CTCFL-209ENST00000433949 CACNA1FO60840 1977 aa15.08■□□□□ 0
CTCFL-209ENST00000433949 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
CTCFL-209ENST00000433949 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
CTCFL-209ENST00000433949 ABCC4O15439 1325 aa15.08■□□□□ 0
CTCFL-209ENST00000433949 MCM10Q7L590 875 aa15.07■□□□□ 0
CTCFL-209ENST00000433949 SMC5Q8IY18 1101 aa15.07■□□□□ 0
CTCFL-209ENST00000433949 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
CTCFL-209ENST00000433949 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms