RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
CDC40-204ENST00000431461 ITGB7P26010 798 aa5.35□□□□□ -1.55
CDC40-204ENST00000431461 NUTM2DQ5VT03 806 aaPredicted RBP5.35□□□□□ -1.55
CDC40-204ENST00000431461 NBPF11Q86T75 865 aa5.35□□□□□ -1.55
CDC40-204ENST00000431461 NUTM2AQ8IVF1 878 aaPredicted RBP5.35□□□□□ -1.55
CDC40-204ENST00000431461 TRERF1Q96PN7 1200 aa5.35□□□□□ -1.55
CDC40-204ENST00000431461 CUEDC1Q9NWM3 386 aaPredicted RBP5.35□□□□□ -1.55
CDC40-204ENST00000431461 TRIM66O15016 1216 aa5.34□□□□□ -1.55
CDC40-204ENST00000431461 RNF144AP50876 292 aaPredicted RBP5.34□□□□□ -1.55
CDC40-204ENST00000431461 RAB15P59190 212 aa5.34□□□□□ -1.55
CDC40-204ENST00000431461 FOXD4L5Q5VV16 416 aaPredicted RBP5.34□□□□□ -1.55
CDC40-204ENST00000431461 SLC10A4Q96EP9 437 aa5.34□□□□□ -1.55
CDC40-204ENST00000431461 ZFP64Q9NPA5 681 aa5.34□□□□□ -1.55
CDC40-204ENST00000431461 GPR25O00155 361 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 ADH1AP07327 375 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 MX2P20592 715 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 PTGIRP43119 386 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 MAP2K3P46734 347 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 QPCTQ16769 361 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
CDC40-204ENST00000431461 SEMA6BQ9H3T3 888 aa5.33□□□□□ -1.56
CDC40-204ENST00000431461 ZC3H4Q9UPT8 1303 aaKnown RBP5.32□□□□□ -1.56
CDC40-204ENST00000431461 SLC24A1O60721 1099 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 LILRB3O75022 631 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 GPC1P35052 558 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 DBN1Q16643 649 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 INTS6LQ5JSJ4 861 aaKnown RBP5.32□□□□□ -1.56
CDC40-204ENST00000431461 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 AK7Q96M32 723 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 ARHGAP9Q9BRR9 750 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 DYRK1BQ9Y463 629 aa5.32□□□□□ -1.56
CDC40-204ENST00000431461 YBX3P16989 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDC40-204ENST00000431461 NBPF20Q3BBV1 942 aa5.31□□□□□ -1.56
CDC40-204ENST00000431461 OXCT2Q9BYC2 517 aaPredicted RBP5.31□□□□□ -1.56
CDC40-204ENST00000431461 LIMD1Q9UGP4 676 aa5.31□□□□□ -1.56
CDC40-204ENST00000431461 GPSM3Q9Y4H4 160 aa5.31□□□□□ -1.56
CDC40-204ENST00000431461 COL8A1P27658 744 aa5.3□□□□□ -1.56
CDC40-204ENST00000431461 SNRPNP63162 240 aaKnown RBP5.3□□□□□ -1.56
CDC40-204ENST00000431461 WDR44Q5JSH3 913 aa5.3□□□□□ -1.56
CDC40-204ENST00000431461 MYSM1Q5VVJ2 828 aa5.3□□□□□ -1.56
CDC40-204ENST00000431461 ZBTB33Q86T24 672 aa5.3□□□□□ -1.56
CDC40-204ENST00000431461 CFHR5Q9BXR6 569 aa5.3□□□□□ -1.56
CDC40-204ENST00000431461 GDF2Q9UK05 429 aaPredicted RBP5.3□□□□□ -1.56
CDC40-204ENST00000431461 RHOQP17081 205 aa5.29□□□□□ -1.56
CDC40-204ENST00000431461 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
CDC40-204ENST00000431461 TMPRSS4Q9NRS4 437 aa5.29□□□□□ -1.56
CDC40-204ENST00000431461 LILRA1O75019 489 aa5.28□□□□□ -1.56
CDC40-204ENST00000431461 RTL5Q5HYW3 569 aaPredicted RBP5.28□□□□□ -1.56
CDC40-204ENST00000431461 RIPOR1Q6ZS17 1223 aa5.28□□□□□ -1.56
CDC40-204ENST00000431461 PRICKLE2Q7Z3G6 844 aa5.28□□□□□ -1.56
CDC40-204ENST00000431461 GTPBP3Q969Y2 492 aaKnown RBP5.28□□□□□ -1.56
CDC40-204ENST00000431461 C1QTNF9BB2RNN3 333 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 PTK2Q05397 1052 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 PDE4DQ08499 809 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 PPP2R2DQ66LE6 453 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 CCDC125Q86Z20 511 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 ZNF784Q8NCA9 323 aaPredicted RBP5.27□□□□□ -1.57
CDC40-204ENST00000431461 NOP53Q9NZM5 478 aaKnown RBP5.27□□□□□ -1.57
CDC40-204ENST00000431461 FKBPLQ9UIM3 349 aa5.27□□□□□ -1.57
CDC40-204ENST00000431461 GNB5O14775 395 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 LINC00114Q6XXX2 140 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 SEPT12Q8IYM1 358 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 GOLGA6L1Q8N7Z2 621 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 EDARADDQ8WWZ3 215 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 PHF24Q9UPV7 400 aa5.26□□□□□ -1.57
CDC40-204ENST00000431461 ADD1P35611 737 aaKnown RBP5.25□□□□□ -1.57
CDC40-204ENST00000431461 TXKP42681 527 aa5.25□□□□□ -1.57
CDC40-204ENST00000431461 CD163Q86VB7 1156 aa5.25□□□□□ -1.57
CDC40-204ENST00000431461 RSPH6AQ9H0K4 717 aa5.25□□□□□ -1.57
CDC40-204ENST00000431461 RRAGCQ9HB90 399 aa5.25□□□□□ -1.57
CDC40-204ENST00000431461 SHISA8B8ZZ34 492 aa5.24□□□□□ -1.57
CDC40-204ENST00000431461 CLK2P49760 499 aaKnown RBP5.24□□□□□ -1.57
CDC40-204ENST00000431461 CTDSPL2Q05D32 466 aa5.24□□□□□ -1.57
CDC40-204ENST00000431461 GRIN2CQ14957 1233 aa5.24□□□□□ -1.57
CDC40-204ENST00000431461 LRRN4Q8WUT4 740 aa5.24□□□□□ -1.57
CDC40-204ENST00000431461 KLRG1Q96E93 195 aa5.24□□□□□ -1.57
CDC40-204ENST00000431461 NUCKS1Q9H1E3 243 aaKnown RBP5.24□□□□□ -1.57
CDC40-204ENST00000431461 ESPNB1AK53 854 aa5.23□□□□□ -1.57
CDC40-204ENST00000431461 SPATA31C2B4DYI2 1134 aa5.23□□□□□ -1.57
CDC40-204ENST00000431461 ERVH48-1M5A8F1 160 aa5.23□□□□□ -1.57
CDC40-204ENST00000431461 F11P03951 625 aa5.23□□□□□ -1.57
CDC40-204ENST00000431461 LBRQ14739 615 aaKnown RBP5.23□□□□□ -1.57
CDC40-204ENST00000431461 NR6A1Q15406 480 aa5.23□□□□□ -1.57
CDC40-204ENST00000431461 FOXD4L6Q3SYB3 417 aaPredicted RBP5.23□□□□□ -1.57
CDC40-204ENST00000431461 FOXD4L3Q6VB84 417 aaPredicted RBP5.23□□□□□ -1.57
CDC40-204ENST00000431461 GAS2L1Q99501 681 aaPredicted RBP5.23□□□□□ -1.57
CDC40-204ENST00000431461 ATP5J2-PTCD1G3V325 749 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 HOXB4P17483 251 aaPredicted RBP5.22□□□□□ -1.57
CDC40-204ENST00000431461 DOC2BQ14184 412 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 PNMA1Q8ND90 353 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 ADAM32Q8TC27 787 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 CYLDQ9NQC7 956 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 POLR3EQ9NVU0 708 aa5.22□□□□□ -1.57
CDC40-204ENST00000431461 MEN1O00255 615 aa5.21□□□□□ -1.58
CDC40-204ENST00000431461 NBPF10Q6P3W6 841 aaKnown RBP5.21□□□□□ -1.58
CDC40-204ENST00000431461 SLCO4C1Q6ZQN7 724 aa5.21□□□□□ -1.58
CDC40-204ENST00000431461 C1orf229Q6ZS94 237 aaPredicted RBP5.21□□□□□ -1.58
CDC40-204ENST00000431461 NBPF15Q8N660 670 aa5.21□□□□□ -1.58
CDC40-204ENST00000431461 OCSTAMPQ9BR26 566 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms