RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 OVOS2Q6IE36 1432 aa11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 THRAP3Q9Y2W1 955 aaKnown RBP11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 ADGRB1O14514 1584 aa11.42□□□□□ -0.58
ECHDC1-207ENST00000430841 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
ECHDC1-207ENST00000430841 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
ECHDC1-207ENST00000430841 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
ECHDC1-207ENST00000430841 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
ECHDC1-207ENST00000430841 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
ECHDC1-207ENST00000430841 LARP1Q6PKG0 1096 aaKnown RBP11.41□□□□□ -0.58
ECHDC1-207ENST00000430841 ARHGEF28Q8N1W1 1705 aaKnown RBP11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 NLRP13Q86W25 1043 aa11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 RGPD4Q7Z3J3 1758 aa11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 PARP4Q9UKK3 1724 aaKnown RBP11.4□□□□□ -0.58
ECHDC1-207ENST00000430841 ERBB3P21860 1342 aa11.39□□□□□ -0.59
ECHDC1-207ENST00000430841 DDB1Q16531 1140 aa11.39□□□□□ -0.59
ECHDC1-207ENST00000430841 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
ECHDC1-207ENST00000430841 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
ECHDC1-207ENST00000430841 ACEP12821 1306 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 CRB1P82279 1406 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 TOM1L2Q6ZVM7 507 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 CDK19Q9BWU1 502 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 TOPAZ1Q8N9V7 1692 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 CPDO75976 1380 aa11.38□□□□□ -0.59
ECHDC1-207ENST00000430841 AKAP12Q02952 1782 aa11.37□□□□□ -0.59
ECHDC1-207ENST00000430841 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
ECHDC1-207ENST00000430841 GSE1Q14687 1217 aa11.37□□□□□ -0.59
ECHDC1-207ENST00000430841 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
ECHDC1-207ENST00000430841 COL5A2P05997 1499 aaPredicted RBP11.37□□□□□ -0.59
ECHDC1-207ENST00000430841 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
ECHDC1-207ENST00000430841 ZBTB7AO95365 584 aa11.36□□□□□ -0.59
ECHDC1-207ENST00000430841 POLR3AO14802 1390 aaPredicted RBP11.36□□□□□ -0.59
ECHDC1-207ENST00000430841 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
ECHDC1-207ENST00000430841 LRRC37A3O60309 1634 aa11.35□□□□□ -0.59
ECHDC1-207ENST00000430841 GCP02774 474 aa11.35□□□□□ -0.59
ECHDC1-207ENST00000430841 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
ECHDC1-207ENST00000430841 PPIP5K1Q6PFW1 1433 aa11.35□□□□□ -0.59
ECHDC1-207ENST00000430841 USP19O94966 1318 aa11.35□□□□□ -0.59
ECHDC1-207ENST00000430841 MYOM1P52179 1685 aa11.34□□□□□ -0.59
ECHDC1-207ENST00000430841 PLSCR1O15162 318 aa11.34□□□□□ -0.59
ECHDC1-207ENST00000430841 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
ECHDC1-207ENST00000430841 BRD4O60885 1362 aaPredicted RBP11.33□□□□□ -0.6
ECHDC1-207ENST00000430841 NLRP6P59044 892 aa11.33□□□□□ -0.6
ECHDC1-207ENST00000430841 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
ECHDC1-207ENST00000430841 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 CASZ1Q86V15 1759 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
ECHDC1-207ENST00000430841 CHD4Q14839 1912 aa11.31□□□□□ -0.6
ECHDC1-207ENST00000430841 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
ECHDC1-207ENST00000430841 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
ECHDC1-207ENST00000430841 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
ECHDC1-207ENST00000430841 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 SOX12O15370 315 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 MTFR1LQ9H019 292 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
ECHDC1-207ENST00000430841 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
ECHDC1-207ENST00000430841 EXOC5O00471 708 aa11.29□□□□□ -0.6
ECHDC1-207ENST00000430841 GPR162Q16538 588 aa11.29□□□□□ -0.6
ECHDC1-207ENST00000430841 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
ECHDC1-207ENST00000430841 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-207ENST00000430841 POLD1P28340 1107 aa11.28□□□□□ -0.6
ECHDC1-207ENST00000430841 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
ECHDC1-207ENST00000430841 TXNRD1Q16881 649 aa11.28□□□□□ -0.6
ECHDC1-207ENST00000430841 USP6P35125 1406 aa11.27□□□□□ -0.6
ECHDC1-207ENST00000430841 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.6
ECHDC1-207ENST00000430841 SLIT3O75094 1523 aa11.27□□□□□ -0.61
ECHDC1-207ENST00000430841 C1QTNF8P60827 252 aa11.27□□□□□ -0.61
ECHDC1-207ENST00000430841 ARXQ96QS3 562 aa11.27□□□□□ -0.61
ECHDC1-207ENST00000430841 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
ECHDC1-207ENST00000430841 CCDC7Q96M83 1385 aa11.27□□□□□ -0.61
ECHDC1-207ENST00000430841 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
ECHDC1-207ENST00000430841 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-207ENST00000430841 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
ECHDC1-207ENST00000430841 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
ECHDC1-207ENST00000430841 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
ECHDC1-207ENST00000430841 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 PTGER2P43116 358 aa11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 BCL9O00512 1426 aa11.24□□□□□ -0.61
ECHDC1-207ENST00000430841 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-207ENST00000430841 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
ECHDC1-207ENST00000430841 NLRP2Q9NX02 1062 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms