RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 GSPT1P15170 499 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 MCM2P49736 904 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 PLCH2O75038 1416 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 INTS4Q96HW7 963 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 YY1AP1Q9H869 796 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 PYCARDQ9ULZ3 195 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 FANCAO15360 1455 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 NEO1Q92859 1461 aa16.85■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 CUL4AQ13619 759 aa16.84■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
CSNK1A1P1-201ENST00000430593 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 PTPRTO14522 1441 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 TSR2Q969E8 191 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ZNF397Q8NF99 534 aaPredicted RBP16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ZC3H13Q5T200 1668 aaKnown RBP16.82■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ARAP3Q8WWN8 1544 aa16.81■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 REC8O95072 547 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 MX1P20591 662 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 NSD2O96028 1365 aa16.8■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 CYP2C19P33261 490 aa16.79■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 MPNDQ8N594 471 aa16.78■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 FEZ2Q9UHY8 353 aaPredicted RBP16.78■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 TRIM6-TRIM34B2RNG4 842 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 CCDC112Q8NEF3 446 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 ZFP91Q96JP5 570 aaPredicted RBP16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
CSNK1A1P1-201ENST00000430593 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 SYCP2Q9BX26 1530 aa16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 USP48Q86UV5 1035 aa16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 GEMIN8Q9NWZ8 242 aaKnown RBP16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 MTHFSP49914 203 aa16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 TCHHQ07283 1943 aa16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 ABCC4O15439 1325 aa16.74■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 UBE2HP62256 183 aa16.74■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 KMT5BQ4FZB7 885 aa16.74■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 IFT172Q9UG01 1749 aa16.74■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 TMPOP42166 694 aaKnown RBP16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 MMP14P50281 582 aa16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 MUM1L1Q5H9M0 696 aa16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RGS12O14924 1447 aa16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 AP5Z1O43299 807 aa16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 DCTPP1Q9H773 170 aa16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 ERC2O15083 957 aa16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 TNNT1P13805 278 aa16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 ANAPC15P60006 121 aa16.71■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 RAD51AP2Q09MP3 1159 aa16.71■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
CSNK1A1P1-201ENST00000430593 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 RAD50Q92878 1312 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SDSP20132 328 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 NOL10Q9BSC4 688 aaKnown RBP16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms