RNA–Protein interactions for RNA: ENST00000429104.1

LINC00843-201, long intergenic non-protein coding RNA 843, humanhuman

TSL 5

Gene LINC00843, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00843-201ENST00000429104 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
LINC00843-201ENST00000429104 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
LINC00843-201ENST00000429104 PPIP5K1Q6PFW1 1433 aa9.72□□□□□ -0.85
LINC00843-201ENST00000429104 BCL9LQ86UU0 1499 aa9.72□□□□□ -0.85
LINC00843-201ENST00000429104 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
LINC00843-201ENST00000429104 UNC5CLQ8IV45 518 aa9.71□□□□□ -0.86
LINC00843-201ENST00000429104 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.861e-9■■□□□ 13.9
LINC00843-201ENST00000429104 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.86
LINC00843-201ENST00000429104 RALGAPBQ86X10 1494 aa9.71□□□□□ -0.86
LINC00843-201ENST00000429104 SLIT2O94813 1529 aa9.71□□□□□ -0.86
LINC00843-201ENST00000429104 PSDA5PKW4 1024 aaPredicted RBP9.7□□□□□ -0.86
LINC00843-201ENST00000429104 GJD4Q96KN9 370 aaPredicted RBP9.7□□□□□ -0.86
LINC00843-201ENST00000429104 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
LINC00843-201ENST00000429104 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
LINC00843-201ENST00000429104 ACEP12821 1306 aa9.7□□□□□ -0.86
LINC00843-201ENST00000429104 AKAP12Q02952 1782 aa9.7□□□□□ -0.86
LINC00843-201ENST00000429104 NRKQ7Z2Y5 1582 aa9.69□□□□□ -0.86
LINC00843-201ENST00000429104 EVC2Q86UK5 1308 aa9.69□□□□□ -0.86
LINC00843-201ENST00000429104 PRDM11Q9NQV5 511 aa9.69□□□□□ -0.86
LINC00843-201ENST00000429104 ZBTB7CA1YPR0 619 aa9.68□□□□□ -0.86
LINC00843-201ENST00000429104 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
LINC00843-201ENST00000429104 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
LINC00843-201ENST00000429104 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
LINC00843-201ENST00000429104 ARHGAP33O14559 1287 aa9.67□□□□□ -0.86
LINC00843-201ENST00000429104 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
LINC00843-201ENST00000429104 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
LINC00843-201ENST00000429104 CARD11Q9BXL7 1154 aa9.67□□□□□ -0.86
LINC00843-201ENST00000429104 EP400Q96L91 3159 aa9.67□□□□□ -0.86
LINC00843-201ENST00000429104 KIAA0232Q92628 1395 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 ZC3H6P61129 1189 aaKnown RBP9.66□□□□□ -0.86
LINC00843-201ENST00000429104 CHRNA2Q15822 529 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 VPS72Q15906 364 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 NBPF8Q3BBV2 869 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 PIK3C2AO00443 1686 aa9.66□□□□□ -0.86
LINC00843-201ENST00000429104 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.86
LINC00843-201ENST00000429104 PLEKHG3A1L390 1219 aa9.65□□□□□ -0.86
LINC00843-201ENST00000429104 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
LINC00843-201ENST00000429104 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
LINC00843-201ENST00000429104 RGPD5Q99666 1765 aa9.65□□□□□ -0.87
LINC00843-201ENST00000429104 USP6P35125 1406 aa9.65□□□□□ -0.87
LINC00843-201ENST00000429104 FAM98CQ17RN3 349 aaKnown RBP9.64□□□□□ -0.87
LINC00843-201ENST00000429104 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
LINC00843-201ENST00000429104 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
LINC00843-201ENST00000429104 EVA1CP58658 441 aa9.63□□□□□ -0.87
LINC00843-201ENST00000429104 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
LINC00843-201ENST00000429104 PCGF6Q9BYE7 350 aa9.63□□□□□ -0.87
LINC00843-201ENST00000429104 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 THSD7AQ9UPZ6 1657 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
LINC00843-201ENST00000429104 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 LTN1O94822 1766 aa9.62□□□□□ -0.87
LINC00843-201ENST00000429104 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
LINC00843-201ENST00000429104 KRT27Q7Z3Y8 459 aa9.61□□□□□ -0.87
LINC00843-201ENST00000429104 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
LINC00843-201ENST00000429104 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
LINC00843-201ENST00000429104 USP19O94966 1318 aa9.6□□□□□ -0.87
LINC00843-201ENST00000429104 TK2O00142 265 aa9.6□□□□□ -0.87
LINC00843-201ENST00000429104 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
LINC00843-201ENST00000429104 SLIT3O75094 1523 aa9.6□□□□□ -0.87
LINC00843-201ENST00000429104 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
LINC00843-201ENST00000429104 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
LINC00843-201ENST00000429104 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
LINC00843-201ENST00000429104 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
LINC00843-201ENST00000429104 SSH2Q76I76 1423 aa9.59□□□□□ -0.87
LINC00843-201ENST00000429104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC00843-201ENST00000429104 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.87
LINC00843-201ENST00000429104 GCP02774 474 aa9.58□□□□□ -0.88
LINC00843-201ENST00000429104 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
LINC00843-201ENST00000429104 HDGFL2Q7Z4V5 671 aaPredicted RBP9.58□□□□□ -0.88
LINC00843-201ENST00000429104 CPDO75976 1380 aa9.58□□□□□ -0.88
LINC00843-201ENST00000429104 SPATA31A1Q5TZJ5 1347 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 PARP4Q9UKK3 1724 aaKnown RBP9.57□□□□□ -0.88
LINC00843-201ENST00000429104 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
LINC00843-201ENST00000429104 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 COL5A2P05997 1499 aaPredicted RBP9.57□□□□□ -0.88
LINC00843-201ENST00000429104 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 COL18A1P39060 1754 aa9.57□□□□□ -0.88
LINC00843-201ENST00000429104 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 CPSF1Q10570 1443 aaKnown RBP9.56□□□□□ -0.88
LINC00843-201ENST00000429104 KIF20BQ96Q89 1820 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 USP47Q96K76 1375 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 ST20-MTHFSA0A0A6YYL1 179 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 TBC1D12O60347 775 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
LINC00843-201ENST00000429104 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
LINC00843-201ENST00000429104 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
LINC00843-201ENST00000429104 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 PDE3BQ13370 1112 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 TOM1L2Q6ZVM7 507 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 DEFB132Q7Z7B7 95 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 TERF2IPQ9NYB0 399 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 NFAT5O94916 1531 aa9.55□□□□□ -0.88
LINC00843-201ENST00000429104 CRB1P82279 1406 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms