RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MX1P20591 662 aa19.39■□□□□ 0.69
C9orf3-206ENST00000428313 REC8O95072 547 aa19.39■□□□□ 0.69
C9orf3-206ENST00000428313 MTHFSP49914 203 aa19.39■□□□□ 0.69
C9orf3-206ENST00000428313 ABCA6Q8N139 1617 aa19.38■□□□□ 0.69
C9orf3-206ENST00000428313 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
C9orf3-206ENST00000428313 CHRM1P11229 460 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-206ENST00000428313 ZNF397Q8NF99 534 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-206ENST00000428313 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
C9orf3-206ENST00000428313 FOXD4L5Q5VV16 416 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-206ENST00000428313 FOXD4L4Q8WXT5 416 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-206ENST00000428313 TMX3Q96JJ7 454 aa19.37■□□□□ 0.69
C9orf3-206ENST00000428313 INO80Q9ULG1 1556 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-206ENST00000428313 GADD45BO75293 160 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-206ENST00000428313 ARHGAP45Q92619 1136 aa19.37■□□□□ 0.69
C9orf3-206ENST00000428313 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
C9orf3-206ENST00000428313 USP48Q86UV5 1035 aa19.36■□□□□ 0.69
C9orf3-206ENST00000428313 SIRT2Q8IXJ6 389 aa19.36■□□□□ 0.69
C9orf3-206ENST00000428313 U2AF1L5P0DN76 240 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-206ENST00000428313 U2AF1Q01081 240 aaKnown RBP eCLIP19.36■□□□□ 0.691e-6■■■■□ 22.3
C9orf3-206ENST00000428313 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
C9orf3-206ENST00000428313 FUCA2Q9BTY2 467 aa19.35■□□□□ 0.69
C9orf3-206ENST00000428313 TRIM6-TRIM34B2RNG4 842 aa19.35■□□□□ 0.69
C9orf3-206ENST00000428313 TMPOP42166 694 aaKnown RBP19.35■□□□□ 0.69
C9orf3-206ENST00000428313 CCDC112Q8NEF3 446 aa19.35■□□□□ 0.69
C9orf3-206ENST00000428313 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
C9orf3-206ENST00000428313 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
C9orf3-206ENST00000428313 PLCH2O75038 1416 aa19.34■□□□□ 0.69
C9orf3-206ENST00000428313 RGS22Q8NE09 1264 aa19.34■□□□□ 0.69
C9orf3-206ENST00000428313 EFCC1Q9HA90 598 aa19.34■□□□□ 0.69
C9orf3-206ENST00000428313 SLFNL1Q499Z3 407 aa19.33■□□□□ 0.68
C9orf3-206ENST00000428313 YY1AP1Q9H869 796 aa19.33■□□□□ 0.68
C9orf3-206ENST00000428313 WDR33Q9C0J8 1336 aaKnown RBP19.33■□□□□ 0.68
C9orf3-206ENST00000428313 TET3O43151 1660 aa19.33■□□□□ 0.68
C9orf3-206ENST00000428313 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
C9orf3-206ENST00000428313 ABCC1P33527 1531 aa19.32■□□□□ 0.68
C9orf3-206ENST00000428313 NSD2O96028 1365 aa19.32■□□□□ 0.68
C9orf3-206ENST00000428313 FEZ2Q9UHY8 353 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-206ENST00000428313 CYP2C19P33261 490 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 TCHHQ07283 1943 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 ERC2O15083 957 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 AP5Z1O43299 807 aa19.31■□□□□ 0.68
C9orf3-206ENST00000428313 RPAP1Q9BWH6 1393 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-206ENST00000428313 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 ERICH4A6NGS2 130 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 SMARCA5O60264 1052 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-206ENST00000428313 TNNT1P13805 278 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 UBE2HP62256 183 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-206ENST00000428313 DCTPP1Q9H773 170 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 NEK4P51957 841 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 KMT5BQ4FZB7 885 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
C9orf3-206ENST00000428313 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
C9orf3-206ENST00000428313 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
C9orf3-206ENST00000428313 KIF24Q5T7B8 1368 aa19.29■□□□□ 0.68
C9orf3-206ENST00000428313 ABCC4O15439 1325 aa19.29■□□□□ 0.68
C9orf3-206ENST00000428313 SDSP20132 328 aa19.29■□□□□ 0.68
C9orf3-206ENST00000428313 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
C9orf3-206ENST00000428313 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-206ENST00000428313 SPC24Q8NBT2 197 aa19.28■□□□□ 0.68
C9orf3-206ENST00000428313 GDPD2Q9HCC8 539 aa19.28■□□□□ 0.68
C9orf3-206ENST00000428313 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-206ENST00000428313 VWDEQ8N2E2 1590 aa19.28■□□□□ 0.68
C9orf3-206ENST00000428313 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
C9orf3-206ENST00000428313 C16orf45Q96MC5 204 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-206ENST00000428313 PTGS1P23219 599 aa19.27■□□□□ 0.68
C9orf3-206ENST00000428313 PLCB2Q00722 1185 aa19.27■□□□□ 0.68
C9orf3-206ENST00000428313 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.68
C9orf3-206ENST00000428313 NAA30Q147X3 362 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-206ENST00000428313 RNF20Q5VTR2 975 aa19.26■□□□□ 0.67
C9orf3-206ENST00000428313 MRPL50Q8N5N7 158 aaKnown RBP19.26■□□□□ 0.67
C9orf3-206ENST00000428313 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
C9orf3-206ENST00000428313 RGS12O14924 1447 aa19.26■□□□□ 0.67
C9orf3-206ENST00000428313 HNRNPH2P55795 449 aaKnown RBP19.25■□□□□ 0.67
C9orf3-206ENST00000428313 ANAPC15P60006 121 aa19.25■□□□□ 0.67
C9orf3-206ENST00000428313 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
C9orf3-206ENST00000428313 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
C9orf3-206ENST00000428313 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
C9orf3-206ENST00000428313 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
C9orf3-206ENST00000428313 RAD51AP2Q09MP3 1159 aa19.24■□□□□ 0.67
C9orf3-206ENST00000428313 ERO1AQ96HE7 468 aa19.24■□□□□ 0.67
C9orf3-206ENST00000428313 GEMIN8Q9NWZ8 242 aaKnown RBP19.24■□□□□ 0.67
C9orf3-206ENST00000428313 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-206ENST00000428313 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-206ENST00000428313 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
C9orf3-206ENST00000428313 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 MCCP23508 829 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
C9orf3-206ENST00000428313 MUM1L1Q5H9M0 696 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 CEP135Q66GS9 1140 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 FBXO38Q6PIJ6 1188 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-206ENST00000428313 FAM200AQ8TCP9 573 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
C9orf3-206ENST00000428313 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
C9orf3-206ENST00000428313 CCDC186Q7Z3E2 898 aa19.21■□□□□ 0.67
C9orf3-206ENST00000428313 IFT172Q9UG01 1749 aa19.21■□□□□ 0.67
C9orf3-206ENST00000428313 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms