RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 MYOM1P52179 1685 aa11.97□□□□□ -0.49
VSIG4-203ENST00000427538 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
VSIG4-203ENST00000427538 BCL9LQ86UU0 1499 aa11.96□□□□□ -0.49
VSIG4-203ENST00000427538 FBLN1P23142 703 aa11.96□□□□□ -0.49
VSIG4-203ENST00000427538 DDX10Q13206 875 aaKnown RBP11.96□□□□□ -0.49
VSIG4-203ENST00000427538 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.49
VSIG4-203ENST00000427538 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.49
VSIG4-203ENST00000427538 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
VSIG4-203ENST00000427538 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
VSIG4-203ENST00000427538 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
VSIG4-203ENST00000427538 IP6K1Q92551 441 aa11.95□□□□□ -0.5
VSIG4-203ENST00000427538 ATRNO75882 1429 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
VSIG4-203ENST00000427538 ABCA3Q99758 1704 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 HOXC9P31274 260 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
VSIG4-203ENST00000427538 IER5LQ5T953 404 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
VSIG4-203ENST00000427538 WDR17Q8IZU2 1322 aa11.93□□□□□ -0.5
VSIG4-203ENST00000427538 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
VSIG4-203ENST00000427538 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
VSIG4-203ENST00000427538 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
VSIG4-203ENST00000427538 SPATA31A5Q5VU36 1347 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 SPATA31A7Q8IWB4 1347 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
VSIG4-203ENST00000427538 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
VSIG4-203ENST00000427538 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
VSIG4-203ENST00000427538 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 FLT4P35916 1363 aa11.92□□□□□ -0.5
VSIG4-203ENST00000427538 NFAT5O94916 1531 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 SEC24BO95487 1268 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 CRB1P82279 1406 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 CRYBG1Q9Y4K1 1723 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
VSIG4-203ENST00000427538 ERBB3P21860 1342 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
VSIG4-203ENST00000427538 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 HSP90AB2PQ58FF8 381 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 CARD10Q9BWT7 1032 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 POLKQ9UBT6 870 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
VSIG4-203ENST00000427538 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
VSIG4-203ENST00000427538 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
VSIG4-203ENST00000427538 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
VSIG4-203ENST00000427538 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
VSIG4-203ENST00000427538 INSRP06213 1382 aa11.88□□□□□ -0.51
VSIG4-203ENST00000427538 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
VSIG4-203ENST00000427538 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 ABCC6O95255 1503 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 EXOC5O00471 708 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 MTHFSP49914 203 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 DDB1Q16531 1140 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
VSIG4-203ENST00000427538 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
VSIG4-203ENST00000427538 RGS12O14924 1447 aa11.86□□□□□ -0.51
VSIG4-203ENST00000427538 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
VSIG4-203ENST00000427538 IL2RBP14784 551 aa11.86□□□□□ -0.51
VSIG4-203ENST00000427538 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
VSIG4-203ENST00000427538 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
VSIG4-203ENST00000427538 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
VSIG4-203ENST00000427538 DIAPH1O60610 1272 aaKnown RBP11.84□□□□□ -0.51
VSIG4-203ENST00000427538 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
VSIG4-203ENST00000427538 PSEN1P49768 467 aa11.84□□□□□ -0.51
VSIG4-203ENST00000427538 RALBP1Q15311 655 aa11.84□□□□□ -0.51
VSIG4-203ENST00000427538 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
VSIG4-203ENST00000427538 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
VSIG4-203ENST00000427538 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
VSIG4-203ENST00000427538 LTN1O94822 1766 aa11.83□□□□□ -0.52
VSIG4-203ENST00000427538 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
VSIG4-203ENST00000427538 EIF4A2Q14240 407 aaKnown RBP11.83□□□□□ -0.52
VSIG4-203ENST00000427538 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
VSIG4-203ENST00000427538 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
VSIG4-203ENST00000427538 GLI3P10071 1580 aa11.83□□□□□ -0.52
VSIG4-203ENST00000427538 SOCS7O14512 581 aa11.82□□□□□ -0.52
VSIG4-203ENST00000427538 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
VSIG4-203ENST00000427538 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
VSIG4-203ENST00000427538 ANKRD26Q9UPS8 1709 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 ANP32CO43423 234 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 PLCG2P16885 1265 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 DDX54Q8TDD1 881 aaKnown RBP11.81□□□□□ -0.52
VSIG4-203ENST00000427538 EYA1Q99502 592 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 COL18A1P39060 1754 aa11.81□□□□□ -0.52
VSIG4-203ENST00000427538 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
VSIG4-203ENST00000427538 FAM182BQ5T319 152 aa11.8□□□□□ -0.52
VSIG4-203ENST00000427538 ZCRB1Q8TBF4 217 aaKnown RBP11.8□□□□□ -0.52
VSIG4-203ENST00000427538 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms