RNA–Protein interactions for RNA: ENST00000427473.2

CTLA4-203, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 5 BASIC

Gene CTLA4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-203ENST00000427473 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.39
CTLA4-203ENST00000427473 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
CTLA4-203ENST00000427473 DDB1Q16531 1140 aa17.45■□□□□ 0.38
CTLA4-203ENST00000427473 EYA1Q99502 592 aa17.45■□□□□ 0.38
CTLA4-203ENST00000427473 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
CTLA4-203ENST00000427473 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
CTLA4-203ENST00000427473 IL13P35225 146 aa17.43■□□□□ 0.38
CTLA4-203ENST00000427473 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
CTLA4-203ENST00000427473 EP400Q96L91 3159 aa17.43■□□□□ 0.38
CTLA4-203ENST00000427473 RALBP1Q15311 655 aa17.42■□□□□ 0.38
CTLA4-203ENST00000427473 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
CTLA4-203ENST00000427473 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
CTLA4-203ENST00000427473 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
CTLA4-203ENST00000427473 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
CTLA4-203ENST00000427473 BCL9O00512 1426 aa17.4■□□□□ 0.38
CTLA4-203ENST00000427473 EXOC5O00471 708 aa17.4■□□□□ 0.38
CTLA4-203ENST00000427473 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
CTLA4-203ENST00000427473 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTLA4-203ENST00000427473 KDRP35968 1356 aa17.4■□□□□ 0.38
CTLA4-203ENST00000427473 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
CTLA4-203ENST00000427473 TATP17735 454 aaPredicted RBP17.39■□□□□ 0.37
CTLA4-203ENST00000427473 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
CTLA4-203ENST00000427473 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
CTLA4-203ENST00000427473 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
CTLA4-203ENST00000427473 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
CTLA4-203ENST00000427473 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
CTLA4-203ENST00000427473 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
CTLA4-203ENST00000427473 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
CTLA4-203ENST00000427473 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
CTLA4-203ENST00000427473 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
CTLA4-203ENST00000427473 SULT6B1Q6IMI4 303 aa17.34■□□□□ 0.37
CTLA4-203ENST00000427473 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
CTLA4-203ENST00000427473 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
CTLA4-203ENST00000427473 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
CTLA4-203ENST00000427473 CCDC125Q86Z20 511 aa17.33■□□□□ 0.36
CTLA4-203ENST00000427473 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
CTLA4-203ENST00000427473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTLA4-203ENST00000427473 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
CTLA4-203ENST00000427473 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
CTLA4-203ENST00000427473 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
CTLA4-203ENST00000427473 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
CTLA4-203ENST00000427473 HMOX1P09601 288 aa17.3■□□□□ 0.36
CTLA4-203ENST00000427473 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
CTLA4-203ENST00000427473 CYP27B1O15528 508 aa17.29■□□□□ 0.36
CTLA4-203ENST00000427473 TRIM37O94972 964 aa17.29■□□□□ 0.36
CTLA4-203ENST00000427473 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
CTLA4-203ENST00000427473 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
CTLA4-203ENST00000427473 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
CTLA4-203ENST00000427473 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
CTLA4-203ENST00000427473 PHKG2P15735 406 aa17.26■□□□□ 0.35
CTLA4-203ENST00000427473 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
CTLA4-203ENST00000427473 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
CTLA4-203ENST00000427473 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
CTLA4-203ENST00000427473 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
CTLA4-203ENST00000427473 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
CTLA4-203ENST00000427473 ANP32CO43423 234 aa17.25■□□□□ 0.35
CTLA4-203ENST00000427473 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
CTLA4-203ENST00000427473 BAG6P46379 1132 aa17.25■□□□□ 0.35
CTLA4-203ENST00000427473 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTLA4-203ENST00000427473 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
CTLA4-203ENST00000427473 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
CTLA4-203ENST00000427473 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
CTLA4-203ENST00000427473 KCNQ2O43526 872 aa17.23■□□□□ 0.35
CTLA4-203ENST00000427473 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
CTLA4-203ENST00000427473 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
CTLA4-203ENST00000427473 KDM6AO15550 1401 aaPredicted RBP17.22■□□□□ 0.35
CTLA4-203ENST00000427473 FCHSD2O94868 740 aa17.22■□□□□ 0.35
CTLA4-203ENST00000427473 APBA3O96018 575 aa17.22■□□□□ 0.35
CTLA4-203ENST00000427473 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
CTLA4-203ENST00000427473 RREB1Q92766 1687 aa17.22■□□□□ 0.35
CTLA4-203ENST00000427473 BTAF1O14981 1849 aa17.21■□□□□ 0.35
CTLA4-203ENST00000427473 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
CTLA4-203ENST00000427473 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
CTLA4-203ENST00000427473 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
CTLA4-203ENST00000427473 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
CTLA4-203ENST00000427473 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
CTLA4-203ENST00000427473 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
CTLA4-203ENST00000427473 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
CTLA4-203ENST00000427473 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
CTLA4-203ENST00000427473 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
CTLA4-203ENST00000427473 PLSCR1O15162 318 aa17.18■□□□□ 0.34
CTLA4-203ENST00000427473 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
CTLA4-203ENST00000427473 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
CTLA4-203ENST00000427473 MRC1P22897 1456 aa17.18■□□□□ 0.34
CTLA4-203ENST00000427473 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
CTLA4-203ENST00000427473 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
CTLA4-203ENST00000427473 ITGB4P16144 1822 aa17.17■□□□□ 0.34
CTLA4-203ENST00000427473 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
CTLA4-203ENST00000427473 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
CTLA4-203ENST00000427473 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
CTLA4-203ENST00000427473 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
CTLA4-203ENST00000427473 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
CTLA4-203ENST00000427473 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
CTLA4-203ENST00000427473 CAPN15O75808 1086 aa17.15■□□□□ 0.34
CTLA4-203ENST00000427473 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTLA4-203ENST00000427473 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
CTLA4-203ENST00000427473 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
CTLA4-203ENST00000427473 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
CTLA4-203ENST00000427473 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
CTLA4-203ENST00000427473 LY75O60449 1722 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms