RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 DNMT3LQ9UJW3 386 aa11.58□□□□□ -0.56
LINC01953-201ENST00000426870 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
LINC01953-201ENST00000426870 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
LINC01953-201ENST00000426870 MEN1O00255 615 aa11.56□□□□□ -0.56
LINC01953-201ENST00000426870 CTSOP43234 321 aaPredicted RBP11.56□□□□□ -0.56
LINC01953-201ENST00000426870 SCTRP47872 440 aa11.56□□□□□ -0.56
LINC01953-201ENST00000426870 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
LINC01953-201ENST00000426870 PHTF2Q8N3S3 785 aa11.56□□□□□ -0.56
LINC01953-201ENST00000426870 PROSER2Q86WR7 435 aaPredicted RBP11.55□□□□□ -0.56
LINC01953-201ENST00000426870 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
LINC01953-201ENST00000426870 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
LINC01953-201ENST00000426870 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
LINC01953-201ENST00000426870 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
LINC01953-201ENST00000426870 GNRH1P01148 92 aa11.53□□□□□ -0.56
LINC01953-201ENST00000426870 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
LINC01953-201ENST00000426870 ALG2Q9H553 416 aa11.53□□□□□ -0.56
LINC01953-201ENST00000426870 TRAK2O60296 914 aa11.52□□□□□ -0.57
LINC01953-201ENST00000426870 LYSMD3Q7Z3D4 306 aa11.52□□□□□ -0.57
LINC01953-201ENST00000426870 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.57
LINC01953-201ENST00000426870 SKIP12755 728 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 GPC1P35052 558 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
LINC01953-201ENST00000426870 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 RNF217Q8TC41 542 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
LINC01953-201ENST00000426870 A6NJR5 290 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 RNF144AP50876 292 aaPredicted RBP11.5□□□□□ -0.57
LINC01953-201ENST00000426870 CLN3Q13286 438 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 IRF7Q92985 503 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
LINC01953-201ENST00000426870 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
LINC01953-201ENST00000426870 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
LINC01953-201ENST00000426870 GTF2E1P29083 439 aaPredicted RBP11.49□□□□□ -0.57
LINC01953-201ENST00000426870 VEGFBP49765 207 aa11.49□□□□□ -0.57
LINC01953-201ENST00000426870 PTSQ03393 145 aa11.49□□□□□ -0.57
LINC01953-201ENST00000426870 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
LINC01953-201ENST00000426870 H3BM21 787 aa11.48□□□□□ -0.57
LINC01953-201ENST00000426870 EML3Q32P44 896 aa11.48□□□□□ -0.57
LINC01953-201ENST00000426870 FOXD4L5Q5VV16 416 aaPredicted RBP11.48□□□□□ -0.57
LINC01953-201ENST00000426870 PRICKLE2Q7Z3G6 844 aa11.47□□□□□ -0.57
LINC01953-201ENST00000426870 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
LINC01953-201ENST00000426870 PIK3CDO00329 1044 aa11.46□□□□□ -0.57
LINC01953-201ENST00000426870 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
LINC01953-201ENST00000426870 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.57
LINC01953-201ENST00000426870 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
LINC01953-201ENST00000426870 PPFIA3O75145 1194 aa11.45□□□□□ -0.58
LINC01953-201ENST00000426870 FNBP4Q8N3X1 1017 aaPredicted RBP11.45□□□□□ -0.58
LINC01953-201ENST00000426870 CCDC155Q8N6L0 562 aa11.44□□□□□ -0.58
LINC01953-201ENST00000426870 GLMNQ92990 594 aa11.42□□□□□ -0.58
LINC01953-201ENST00000426870 CALR3Q96L12 384 aaKnown RBP11.42□□□□□ -0.58
LINC01953-201ENST00000426870 ZSCAN10Q96SZ4 725 aaPredicted RBP11.42□□□□□ -0.58
LINC01953-201ENST00000426870 SLC35F4A4IF30 521 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 PSME1Q06323 249 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 NCOA4Q13772 614 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
LINC01953-201ENST00000426870 IL2RAP01589 272 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 RHOQP17081 205 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 CENPCQ03188 943 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 GNASQ5JWF2 1037 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 TMEM214Q6NUQ4 689 aaKnown RBP11.4□□□□□ -0.58
LINC01953-201ENST00000426870 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
LINC01953-201ENST00000426870 POU4F2Q12837 409 aa11.39□□□□□ -0.59
LINC01953-201ENST00000426870 LCE2AQ5TA79 106 aaPredicted RBP11.39□□□□□ -0.59
LINC01953-201ENST00000426870 TAS1R3Q7RTX0 852 aa11.39□□□□□ -0.59
LINC01953-201ENST00000426870 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
LINC01953-201ENST00000426870 ATP9BO43861 1147 aa11.38□□□□□ -0.59
LINC01953-201ENST00000426870 GDF10P55107 478 aa11.38□□□□□ -0.59
LINC01953-201ENST00000426870 DEPDC4Q8N2C3 294 aa11.38□□□□□ -0.59
LINC01953-201ENST00000426870 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
LINC01953-201ENST00000426870 SPATA31C2B4DYI2 1134 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 ITGA6P23229 1130 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 GTF2IP78347 998 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 TLR1Q15399 786 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 WDR44Q5JSH3 913 aa11.37□□□□□ -0.59
LINC01953-201ENST00000426870 CDC14CA4D256 554 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
LINC01953-201ENST00000426870 INHAP05111 366 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 INSM1Q01101 510 aaPredicted RBP11.36□□□□□ -0.59
LINC01953-201ENST00000426870 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
LINC01953-201ENST00000426870 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 TIMMDC1Q9NPL8 285 aa11.36□□□□□ -0.59
LINC01953-201ENST00000426870 WIPF1O43516 503 aa11.35□□□□□ -0.59
LINC01953-201ENST00000426870 GMPRP36959 345 aa11.35□□□□□ -0.59
LINC01953-201ENST00000426870 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
LINC01953-201ENST00000426870 UCN2Q96RP3 112 aa11.35□□□□□ -0.59
LINC01953-201ENST00000426870 DYRK1BQ9Y463 629 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms