RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
SEC61A1-202ENST00000424880 TMPOP42166 694 aaKnown RBP13.74□□□□□ -0.21
SEC61A1-202ENST00000424880 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
SEC61A1-202ENST00000424880 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 KCNJ4P48050 445 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
SEC61A1-202ENST00000424880 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
SEC61A1-202ENST00000424880 KIF1BO60333 1816 aa13.72□□□□□ -0.21
SEC61A1-202ENST00000424880 ST18O60284 1047 aa13.72□□□□□ -0.21
SEC61A1-202ENST00000424880 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
SEC61A1-202ENST00000424880 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 AGLP35573 1532 aa13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 V9GYY5 206 aaPredicted RBP13.71□□□□□ -0.21
SEC61A1-202ENST00000424880 NOS1P29475 1434 aa13.71□□□□□ -0.22
SEC61A1-202ENST00000424880 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.22
SEC61A1-202ENST00000424880 ADGRB3O60242 1522 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 AP5Z1O43299 807 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 MYOM2P54296 1465 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 SDSP20132 328 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 CAMSAP1Q5T5Y3 1602 aa13.7□□□□□ -0.22
SEC61A1-202ENST00000424880 NPHP1O15259 732 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 C16orf45Q96MC5 204 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 IFT172Q9UG01 1749 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 NRXN1Q9ULB1 1477 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 FKBP5Q13451 457 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 MYOM1P52179 1685 aa13.69□□□□□ -0.22
SEC61A1-202ENST00000424880 IDI1Q13907 227 aa13.68□□□□□ -0.22
SEC61A1-202ENST00000424880 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
SEC61A1-202ENST00000424880 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
SEC61A1-202ENST00000424880 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
SEC61A1-202ENST00000424880 ST7Q9NRC1 585 aa13.68□□□□□ -0.22
SEC61A1-202ENST00000424880 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 FER1L4A9Z1Z3 1794 aa13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-202ENST00000424880 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 MBD3O95983 291 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 LRMPQ12912 555 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 TTC22Q5TAA0 569 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 HMOX1P09601 288 aa13.66□□□□□ -0.22
SEC61A1-202ENST00000424880 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 KRT24Q2M2I5 525 aa13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 FIBPO43427 364 aa13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-202ENST00000424880 PTGS1P23219 599 aa13.64□□□□□ -0.23
SEC61A1-202ENST00000424880 AEBP1Q8IUX7 1158 aa13.64□□□□□ -0.23
SEC61A1-202ENST00000424880 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
SEC61A1-202ENST00000424880 C14orf93Q9H972 538 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-202ENST00000424880 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
SEC61A1-202ENST00000424880 PPLO60437 1756 aa13.63□□□□□ -0.23
SEC61A1-202ENST00000424880 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
SEC61A1-202ENST00000424880 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
SEC61A1-202ENST00000424880 BRD1O95696 1058 aa13.63□□□□□ -0.23
SEC61A1-202ENST00000424880 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
SEC61A1-202ENST00000424880 SLC20A2Q08357 652 aa13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 KDM4AO75164 1064 aa13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 CAMK4Q16566 473 aa13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 ANKRD7Q92527 254 aa13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
SEC61A1-202ENST00000424880 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 RPGRIP1LQ68CZ1 1315 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 DCTN1Q14203 1278 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 DRC7Q8IY82 874 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 ANO2Q9NQ90 1003 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
SEC61A1-202ENST00000424880 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 TCHHQ07283 1943 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms