RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
EPHA4-206ENST00000424339 CENPJQ9HC77 1338 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-206ENST00000424339 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
EPHA4-206ENST00000424339 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-206ENST00000424339 POGKQ9P215 609 aa9.85□□□□□ -0.83
EPHA4-206ENST00000424339 STK26Q9P289 416 aa9.85□□□□□ -0.83
EPHA4-206ENST00000424339 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
EPHA4-206ENST00000424339 ADGRB2O60241 1585 aa9.84□□□□□ -0.83
EPHA4-206ENST00000424339 ADGRL3Q9HAR2 1447 aa9.84□□□□□ -0.83
EPHA4-206ENST00000424339 LRRC7Q96NW7 1537 aa9.84□□□□□ -0.83
EPHA4-206ENST00000424339 DPYSL4O14531 572 aa9.84□□□□□ -0.83
EPHA4-206ENST00000424339 PRAM1Q96QH2 718 aa9.84□□□□□ -0.83
EPHA4-206ENST00000424339 QRICH2Q9H0J4 1663 aa9.83□□□□□ -0.84
EPHA4-206ENST00000424339 C19orf44Q9H6X5 657 aa9.83□□□□□ -0.84
EPHA4-206ENST00000424339 MSH6P52701 1360 aa9.83□□□□□ -0.84
EPHA4-206ENST00000424339 TMEM94Q12767 1356 aa9.83□□□□□ -0.84
EPHA4-206ENST00000424339 CDC42BPGQ6DT37 1551 aa9.83□□□□□ -0.84
EPHA4-206ENST00000424339 MAP3K7O43318 606 aa9.82□□□□□ -0.84
EPHA4-206ENST00000424339 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
EPHA4-206ENST00000424339 ZNF516Q92618 1163 aa9.82□□□□□ -0.84
EPHA4-206ENST00000424339 SMAPO00193 183 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 GGCXP38435 758 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
EPHA4-206ENST00000424339 NALCNQ8IZF0 1738 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 EVC2Q86UK5 1308 aa9.81□□□□□ -0.84
EPHA4-206ENST00000424339 XIRP1Q702N8 1843 aaKnown RBP9.8□□□□□ -0.84
EPHA4-206ENST00000424339 ST20-MTHFSA0A0A6YYL1 179 aa9.8□□□□□ -0.84
EPHA4-206ENST00000424339 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-206ENST00000424339 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 ATF3P18847 181 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 TMF1P82094 1093 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 NBR1Q14596 966 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 ANKARQ7Z5J8 1434 aa9.79□□□□□ -0.84
EPHA4-206ENST00000424339 ATAD2Q6PL18 1390 aa9.78□□□□□ -0.84
EPHA4-206ENST00000424339 RNF40O75150 1001 aa9.78□□□□□ -0.84
EPHA4-206ENST00000424339 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
EPHA4-206ENST00000424339 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-206ENST00000424339 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
EPHA4-206ENST00000424339 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
EPHA4-206ENST00000424339 CDCA7LQ96GN5 454 aa9.78□□□□□ -0.84
EPHA4-206ENST00000424339 TESK2Q96S53 571 aa9.78□□□□□ -0.84
EPHA4-206ENST00000424339 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.84
EPHA4-206ENST00000424339 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.84
EPHA4-206ENST00000424339 FMN2Q9NZ56 1722 aa9.77□□□□□ -0.85
EPHA4-206ENST00000424339 WASLO00401 505 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-206ENST00000424339 SAFB2Q14151 953 aaKnown RBP eCLIP9.77□□□□□ -0.85
EPHA4-206ENST00000424339 CERKQ8TCT0 537 aa9.77□□□□□ -0.85
EPHA4-206ENST00000424339 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-206ENST00000424339 ITSN1Q15811 1721 aa9.76□□□□□ -0.85
EPHA4-206ENST00000424339 TOM1O60784 492 aa9.76□□□□□ -0.85
EPHA4-206ENST00000424339 PRSS12P56730 875 aa9.76□□□□□ -0.85
EPHA4-206ENST00000424339 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
EPHA4-206ENST00000424339 TATDN2Q93075 761 aa9.75□□□□□ -0.85
EPHA4-206ENST00000424339 PNMA3Q9UL41 463 aa9.75□□□□□ -0.85
EPHA4-206ENST00000424339 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
EPHA4-206ENST00000424339 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
EPHA4-206ENST00000424339 CDK19Q9BWU1 502 aa9.74□□□□□ -0.85
EPHA4-206ENST00000424339 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
EPHA4-206ENST00000424339 MST1RQ04912 1400 aa9.73□□□□□ -0.85
EPHA4-206ENST00000424339 ATP7BP35670 1465 aa9.73□□□□□ -0.85
EPHA4-206ENST00000424339 NBPF26B4DH59 902 aa9.73□□□□□ -0.85
EPHA4-206ENST00000424339 APLP1P51693 650 aa9.73□□□□□ -0.85
EPHA4-206ENST00000424339 TMUB1Q9BVT8 246 aa9.73□□□□□ -0.85
EPHA4-206ENST00000424339 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-206ENST00000424339 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
EPHA4-206ENST00000424339 TOPAZ1Q8N9V7 1692 aa9.72□□□□□ -0.85
EPHA4-206ENST00000424339 SLAIN2Q9P270 581 aa9.72□□□□□ -0.85
EPHA4-206ENST00000424339 BRD4O60885 1362 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-206ENST00000424339 DISP3Q9P2K9 1392 aa9.72□□□□□ -0.85
EPHA4-206ENST00000424339 PKDCCQ504Y2 493 aa9.71□□□□□ -0.86
EPHA4-206ENST00000424339 NUDT16Q96DE0 195 aaKnown RBP9.71□□□□□ -0.86
EPHA4-206ENST00000424339 FAM198AQ9UFP1 575 aa9.71□□□□□ -0.86
EPHA4-206ENST00000424339 USP32Q8NFA0 1604 aa9.71□□□□□ -0.86
EPHA4-206ENST00000424339 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
EPHA4-206ENST00000424339 COPS2P61201 443 aa9.7□□□□□ -0.86
EPHA4-206ENST00000424339 NECTIN2Q92692 538 aa9.7□□□□□ -0.86
EPHA4-206ENST00000424339 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
EPHA4-206ENST00000424339 POLR3AO14802 1390 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-206ENST00000424339 PPIP5K1Q6PFW1 1433 aa9.69□□□□□ -0.86
EPHA4-206ENST00000424339 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
EPHA4-206ENST00000424339 CCDC7Q96M83 1385 aa9.69□□□□□ -0.86
EPHA4-206ENST00000424339 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
EPHA4-206ENST00000424339 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-206ENST00000424339 KIF7Q2M1P5 1343 aa9.68□□□□□ -0.86
EPHA4-206ENST00000424339 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
EPHA4-206ENST00000424339 SLC19A1P41440 591 aa9.68□□□□□ -0.86
EPHA4-206ENST00000424339 ESCO1Q5FWF5 840 aa9.68□□□□□ -0.86
EPHA4-206ENST00000424339 NUDT18Q6ZVK8 323 aa9.68□□□□□ -0.86
EPHA4-206ENST00000424339 ANKRD36BQ8N2N9 1353 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 DGAT1O75907 488 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 BRINP3Q76B58 766 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 HDGFL2Q7Z4V5 671 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-206ENST00000424339 MYOM1P52179 1685 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
EPHA4-206ENST00000424339 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-206ENST00000424339 CPSF1Q10570 1443 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms