RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 RNF144AP50876 292 aaPredicted RBP5.33□□□□□ -1.56
PMS1-209ENST00000424059 PCDHB9Q9Y5E1 797 aa5.33□□□□□ -1.56
PMS1-209ENST00000424059 FOXD4L5Q5VV16 416 aaPredicted RBP5.32□□□□□ -1.56
PMS1-209ENST00000424059 LYSMD3Q7Z3D4 306 aa5.32□□□□□ -1.56
PMS1-209ENST00000424059 RNF225M0QZC1 329 aaPredicted RBP5.31□□□□□ -1.56
PMS1-209ENST00000424059 FBXO45P0C2W1 286 aa5.31□□□□□ -1.56
PMS1-209ENST00000424059 ADD1P35611 737 aaKnown RBP5.31□□□□□ -1.56
PMS1-209ENST00000424059 RAB15P59190 212 aa5.31□□□□□ -1.56
PMS1-209ENST00000424059 KCNMA1Q12791 1236 aa5.31□□□□□ -1.56
PMS1-209ENST00000424059 NDUFB9Q9Y6M9 179 aa5.31□□□□□ -1.56
PMS1-209ENST00000424059 CC2D2BQ6DHV5 1058 aa5.31□□□□□ -1.56
PMS1-209ENST00000424059 GPR161Q8N6U8 529 aaKnown RBP5.31□□□□□ -1.56
PMS1-209ENST00000424059 COL25A1Q9BXS0 654 aaPredicted RBP5.31□□□□□ -1.56
PMS1-209ENST00000424059 ATP5J2-PTCD1G3V325 749 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 ERVK-9P63128 1117 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 KRT76Q01546 638 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 CYP2U1Q7Z449 544 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 KDF1Q8NAX2 398 aaPredicted RBP5.3□□□□□ -1.56
PMS1-209ENST00000424059 IL27Q8NEV9 243 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 CNTNAP3BQ96NU0 1288 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 CNTNAP3Q9BZ76 1288 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 ZNF395Q9H8N7 513 aaPredicted RBP5.3□□□□□ -1.56
PMS1-209ENST00000424059 CYLDQ9NQC7 956 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 GIGYF1O75420 1035 aaPredicted RBP5.3□□□□□ -1.56
PMS1-209ENST00000424059 SLURP2P0DP57 97 aa5.3□□□□□ -1.56
PMS1-209ENST00000424059 BRPF1P55201 1214 aaPredicted RBP5.3□□□□□ -1.56
PMS1-209ENST00000424059 SENP3-EIF4A1A0A087X0R7 540 aa5.29□□□□□ -1.56
PMS1-209ENST00000424059 VWA5B2Q8N398 1253 aa5.29□□□□□ -1.56
PMS1-209ENST00000424059 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
PMS1-209ENST00000424059 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
PMS1-209ENST00000424059 CDC14CA4D256 554 aa5.28□□□□□ -1.56
PMS1-209ENST00000424059 WDR44Q5JSH3 913 aa5.28□□□□□ -1.56
PMS1-209ENST00000424059 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
PMS1-209ENST00000424059 ZNF385CQ66K41 422 aaPredicted RBP5.27□□□□□ -1.57
PMS1-209ENST00000424059 TRIM22Q8IYM9 498 aa5.27□□□□□ -1.57
PMS1-209ENST00000424059 SPATA31C2B4DYI2 1134 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 H7C1W4 665 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 SRSF11Q05519 484 aaKnown RBP5.26□□□□□ -1.57
PMS1-209ENST00000424059 CLN3Q13286 438 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 FOXR1Q6PIV2 292 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 MTMR14Q8NCE2 650 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 NLRP3Q96P20 1036 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 ESF1Q9H501 851 aaKnown RBP5.26□□□□□ -1.57
PMS1-209ENST00000424059 DYRK1BQ9Y463 629 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 A0A1W2PRU2 124 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 RNFT1Q5M7Z0 435 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 SVOPQ8N4V2 548 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 ADAMTS8Q9UP79 889 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 PCDHB11Q9Y5F2 797 aa5.26□□□□□ -1.57
PMS1-209ENST00000424059 MEN1O00255 615 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 TRAK2O60296 914 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 GPR37L1O60883 481 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 GNRH1P01148 92 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 GRIP2Q9C0E4 1043 aa5.25□□□□□ -1.57
PMS1-209ENST00000424059 ARHGEF15O94989 841 aa5.24□□□□□ -1.57
PMS1-209ENST00000424059 MYCP01106 439 aaPredicted RBP5.24□□□□□ -1.57
PMS1-209ENST00000424059 MAP3K10Q02779 954 aa5.24□□□□□ -1.57
PMS1-209ENST00000424059 SLC27A3Q5K4L6 730 aa5.24□□□□□ -1.57
PMS1-209ENST00000424059 MBIPQ9NS73 344 aa5.24□□□□□ -1.57
PMS1-209ENST00000424059 ADAMTS2O95450 1211 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 KANK3Q6NY19 840 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 PRICKLE2Q7Z3G6 844 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 TMEM151AQ8N4L1 468 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 ZNF837Q96EG3 531 aaPredicted RBP5.23□□□□□ -1.57
PMS1-209ENST00000424059 OSBPL3Q9H4L5 887 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 RHOQP17081 205 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 GSK3AP49840 483 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 EIF4G2P78344 907 aaKnown RBP eCLIP5.23□□□□□ -1.57
PMS1-209ENST00000424059 GAS6Q14393 721 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 NBPF10Q6P3W6 841 aaKnown RBP5.23□□□□□ -1.57
PMS1-209ENST00000424059 NBPF15Q8N660 670 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 SCARF2Q96GP6 870 aaPredicted RBP5.23□□□□□ -1.57
PMS1-209ENST00000424059 TRERF1Q96PN7 1200 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 ENAMQ9NRM1 1142 aa5.23□□□□□ -1.57
PMS1-209ENST00000424059 CUEDC1Q9NWM3 386 aaPredicted RBP5.23□□□□□ -1.57
PMS1-209ENST00000424059 MARSP56192 900 aaKnown RBP5.22□□□□□ -1.57
PMS1-209ENST00000424059 RASSF7Q02833 373 aa5.22□□□□□ -1.57
PMS1-209ENST00000424059 LBRQ14739 615 aaKnown RBP5.22□□□□□ -1.57
PMS1-209ENST00000424059 TAS1R3Q7RTX0 852 aa5.22□□□□□ -1.57
PMS1-209ENST00000424059 SNRKQ9NRH2 765 aa5.22□□□□□ -1.57
PMS1-209ENST00000424059 LRRC4BQ9NT99 713 aa5.22□□□□□ -1.57
PMS1-209ENST00000424059 CEP126Q9P2H0 1117 aa5.22□□□□□ -1.57
PMS1-209ENST00000424059 NSFL1CQ9UNZ2 370 aaKnown RBP5.22□□□□□ -1.57
PMS1-209ENST00000424059 WASLO00401 505 aaPredicted RBP5.21□□□□□ -1.57
PMS1-209ENST00000424059 GTF2E1P29083 439 aaPredicted RBP5.21□□□□□ -1.57
PMS1-209ENST00000424059 ESCO1Q5FWF5 840 aa5.21□□□□□ -1.57
PMS1-209ENST00000424059 ESYT1Q9BSJ8 1104 aa5.21□□□□□ -1.57
PMS1-209ENST00000424059 TTBK1Q5TCY1 1321 aaPredicted RBP5.21□□□□□ -1.58
PMS1-209ENST00000424059 GDF11O95390 407 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 F11P03951 625 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 SCTRP47872 440 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 POU4F2Q12837 409 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 WHAMMQ8TF30 809 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 SIRT1Q96EB6 747 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 XAGE2Q96GT9 111 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 ARHGEF10LQ9HCE6 1279 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 TIMMDC1Q9NPL8 285 aa5.21□□□□□ -1.58
PMS1-209ENST00000424059 DNMT3AQ9Y6K1 912 aaPredicted RBP5.21□□□□□ -1.58
PMS1-209ENST00000424059 IGHA1P01876 353 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms