RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
AFF3-206ENST00000423966 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
AFF3-206ENST00000423966 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
AFF3-206ENST00000423966 COL16A1Q07092 1604 aaPredicted RBP12.55□□□□□ -0.4
AFF3-206ENST00000423966 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
AFF3-206ENST00000423966 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
AFF3-206ENST00000423966 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
AFF3-206ENST00000423966 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
AFF3-206ENST00000423966 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.41
AFF3-206ENST00000423966 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
AFF3-206ENST00000423966 LTV1Q96GA3 475 aaPredicted RBP12.51□□□□□ -0.41
AFF3-206ENST00000423966 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
AFF3-206ENST00000423966 COL18A1P39060 1754 aa12.51□□□□□ -0.41
AFF3-206ENST00000423966 APAF1O14727 1248 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 JCADQ9P266 1359 aa12.5□□□□□ -0.41
AFF3-206ENST00000423966 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
AFF3-206ENST00000423966 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 HMOX1P09601 288 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
AFF3-206ENST00000423966 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 EYA1Q99502 592 aa12.49□□□□□ -0.41
AFF3-206ENST00000423966 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
AFF3-206ENST00000423966 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
AFF3-206ENST00000423966 KDRP35968 1356 aa12.47□□□□□ -0.41
AFF3-206ENST00000423966 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
AFF3-206ENST00000423966 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
AFF3-206ENST00000423966 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 ERBB3P21860 1342 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 EVA1CP58658 441 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
AFF3-206ENST00000423966 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
AFF3-206ENST00000423966 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
AFF3-206ENST00000423966 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
AFF3-206ENST00000423966 SPATA31A6Q5VVP1 1343 aa12.45□□□□□ -0.42
AFF3-206ENST00000423966 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
AFF3-206ENST00000423966 RIPK4P57078 832 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
AFF3-206ENST00000423966 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 AEBP1Q8IUX7 1158 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
AFF3-206ENST00000423966 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 WDR17Q8IZU2 1322 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
AFF3-206ENST00000423966 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
AFF3-206ENST00000423966 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
AFF3-206ENST00000423966 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
AFF3-206ENST00000423966 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
AFF3-206ENST00000423966 HSPA1LP34931 641 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
AFF3-206ENST00000423966 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
AFF3-206ENST00000423966 NWD2Q9ULI1 1742 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
AFF3-206ENST00000423966 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
AFF3-206ENST00000423966 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 BTG4Q9NY30 223 aa12.41□□□□□ -0.42
AFF3-206ENST00000423966 E9PSI1 815 aa12.4□□□□□ -0.42
AFF3-206ENST00000423966 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
AFF3-206ENST00000423966 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
AFF3-206ENST00000423966 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
AFF3-206ENST00000423966 IL16Q14005 1332 aa12.39□□□□□ -0.43
AFF3-206ENST00000423966 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
AFF3-206ENST00000423966 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
AFF3-206ENST00000423966 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
AFF3-206ENST00000423966 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
AFF3-206ENST00000423966 PARP4Q9UKK3 1724 aaKnown RBP12.39□□□□□ -0.43
AFF3-206ENST00000423966 CRB1P82279 1406 aa12.38□□□□□ -0.43
AFF3-206ENST00000423966 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
AFF3-206ENST00000423966 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
AFF3-206ENST00000423966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
AFF3-206ENST00000423966 GNAT3A8MTJ3 354 aa12.37□□□□□ -0.43
AFF3-206ENST00000423966 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
AFF3-206ENST00000423966 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
AFF3-206ENST00000423966 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
AFF3-206ENST00000423966 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
AFF3-206ENST00000423966 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms