RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 DDX17Q92841 729 aaKnown RBP3.49□□□□□ -1.85
UBE2W-202ENST00000422906 AMOTL2Q9Y2J4 779 aa3.49□□□□□ -1.85
UBE2W-202ENST00000422906 KCNQ2O43526 872 aa3.48□□□□□ -1.85
UBE2W-202ENST00000422906 P3H3Q8IVL6 736 aa3.48□□□□□ -1.85
UBE2W-202ENST00000422906 PTF1AQ7RTS3 328 aa3.48□□□□□ -1.85
UBE2W-202ENST00000422906 RIC1Q4ADV7 1423 aa3.48□□□□□ -1.85
UBE2W-202ENST00000422906 YBX3P16989 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
UBE2W-202ENST00000422906 FOXK2Q01167 660 aa3.48□□□□□ -1.85
UBE2W-202ENST00000422906 CFDP1Q9UEE9 299 aaPredicted RBP3.48□□□□□ -1.85
UBE2W-202ENST00000422906 THRAP3Q9Y2W1 955 aaKnown RBP3.48□□□□□ -1.85
UBE2W-202ENST00000422906 ORAI2Q96SN7 254 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 DDX60LQ5H9U9 1706 aaKnown RBP3.47□□□□□ -1.85
UBE2W-202ENST00000422906 COL4A4P53420 1690 aaPredicted RBP3.47□□□□□ -1.85
UBE2W-202ENST00000422906 PASKQ96RG2 1323 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 PPEF1O14829 653 aaPredicted RBP3.47□□□□□ -1.85
UBE2W-202ENST00000422906 DEFB132Q7Z7B7 95 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 CDK11AQ9UQ88 783 aaPredicted RBP3.47□□□□□ -1.85
UBE2W-202ENST00000422906 LRRC37A2A6NM11 1700 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 POTECB2RU33 542 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 PPP1R15AO75807 674 aaPredicted RBP3.47□□□□□ -1.85
UBE2W-202ENST00000422906 KCNA3P22001 575 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 PRO3102Q9H379 93 aa3.47□□□□□ -1.85
UBE2W-202ENST00000422906 PPIP5K1Q6PFW1 1433 aa3.46□□□□□ -1.85
UBE2W-202ENST00000422906 CDK5RAP2Q96SN8 1893 aa3.46□□□□□ -1.85
UBE2W-202ENST00000422906 PNPLA7Q6ZV29 1317 aa3.46□□□□□ -1.85
UBE2W-202ENST00000422906 PLA2G5P39877 138 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 SF3B2Q13435 895 aaKnown RBP3.46□□□□□ -1.86
UBE2W-202ENST00000422906 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBE2W-202ENST00000422906 ANKRD30BQ9BXX2 1392 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 USP21Q9UK80 565 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 DNAH14Q0VDD8 3507 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 PTPRSQ13332 1948 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 DCHS1Q96JQ0 3298 aa3.46□□□□□ -1.86
UBE2W-202ENST00000422906 COL1A1P02452 1464 aaPredicted RBP3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SPDYE2BA6NHP3 402 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SPDYE6P0CI01 402 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 EZH2Q15910 746 aaKnown RBP3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SPDYE2Q495Y8 402 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 COL13A1Q5TAT6 717 aaPredicted RBP3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SLC51AQ86UW1 340 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 AMIGO3Q86WK7 504 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 GRIN3BO60391 1043 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 C14orf93Q9H972 538 aaKnown RBP3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SEPT12Q8IYM1 358 aa3.45□□□□□ -1.86
UBE2W-202ENST00000422906 SNX27Q96L92 541 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 SIPA1L1O43166 1804 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 RBM42Q9BTD8 480 aaKnown RBP3.44□□□□□ -1.86
UBE2W-202ENST00000422906 SCN9AQ15858 1988 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 PLEKHG3A1L390 1219 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 ZNF827Q17R98 1081 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 AKAP11Q9UKA4 1901 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 NPHP3Q7Z494 1330 aa3.44□□□□□ -1.86
UBE2W-202ENST00000422906 CHRM1P11229 460 aaPredicted RBP3.43□□□□□ -1.86
UBE2W-202ENST00000422906 MEX3CQ5U5Q3 659 aaKnown RBP3.43□□□□□ -1.86
UBE2W-202ENST00000422906 GPR153Q6NV75 609 aa3.43□□□□□ -1.86
UBE2W-202ENST00000422906 TRIM52Q96A61 297 aa3.43□□□□□ -1.86
UBE2W-202ENST00000422906 LRRC4BQ9NT99 713 aa3.43□□□□□ -1.86
UBE2W-202ENST00000422906 RANBP2P49792 3224 aaKnown RBP3.43□□□□□ -1.86
UBE2W-202ENST00000422906 VCANP13611 3396 aa3.43□□□□□ -1.86
UBE2W-202ENST00000422906 SLC26A8Q96RN1 970 aa3.43□□□□□ -1.86
UBE2W-202ENST00000422906 TRANK1O15050 2925 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 HMGB2P26583 209 aaKnown RBP3.42□□□□□ -1.86
UBE2W-202ENST00000422906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.42□□□□□ -1.86
UBE2W-202ENST00000422906 ADGRF5Q8IZF2 1346 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 DOCK2Q92608 1830 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 GGT6Q6P531 493 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 CHRDL2Q6WN34 429 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 KRT27Q7Z3Y8 459 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 PLXNA3P51805 1871 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 GBF1Q92538 1859 aa3.42□□□□□ -1.86
UBE2W-202ENST00000422906 MYH3P11055 1940 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 NPC1L1Q9UHC9 1359 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 ANKRD36BQ8N2N9 1353 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 SYT17Q9BSW7 474 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 MAP3K19Q56UN5 1328 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 TONSLQ96HA7 1378 aa3.41□□□□□ -1.86
UBE2W-202ENST00000422906 CTCFP49711 727 aaPredicted RBP3.4□□□□□ -1.86
UBE2W-202ENST00000422906 REM2Q8IYK8 340 aaPredicted RBP3.4□□□□□ -1.86
UBE2W-202ENST00000422906 BCL11BQ9C0K0 894 aaPredicted RBP3.4□□□□□ -1.86
UBE2W-202ENST00000422906 KANK1Q14678 1352 aa3.4□□□□□ -1.86
UBE2W-202ENST00000422906 NBPF8Q3BBV2 869 aa3.4□□□□□ -1.86
UBE2W-202ENST00000422906 NBPF14Q5TI25 921 aa3.4□□□□□ -1.86
UBE2W-202ENST00000422906 PROSER2Q86WR7 435 aaPredicted RBP3.4□□□□□ -1.86
UBE2W-202ENST00000422906 PELP1Q8IZL8 1130 aaKnown RBP3.4□□□□□ -1.86
UBE2W-202ENST00000422906 CHD9Q3L8U1 2897 aa3.4□□□□□ -1.87
UBE2W-202ENST00000422906 CASP8AP2Q9UKL3 1982 aa3.4□□□□□ -1.87
UBE2W-202ENST00000422906 KMT2BQ9UMN6 2715 aaPredicted RBP3.4□□□□□ -1.87
UBE2W-202ENST00000422906 CREBZFQ9NS37 354 aa3.4□□□□□ -1.87
UBE2W-202ENST00000422906 SPEF2Q9C093 1822 aa3.4□□□□□ -1.87
UBE2W-202ENST00000422906 RLFQ13129 1914 aa3.4□□□□□ -1.87
UBE2W-202ENST00000422906 NUTM2BA6NNL0 878 aaPredicted RBP3.39□□□□□ -1.87
UBE2W-202ENST00000422906 NUTM2EB1AL46 878 aaPredicted RBP3.39□□□□□ -1.87
UBE2W-202ENST00000422906 DLL1O00548 723 aa3.39□□□□□ -1.87
UBE2W-202ENST00000422906 CAPN2P17655 700 aa3.39□□□□□ -1.87
UBE2W-202ENST00000422906 NUTM2DQ5VT03 806 aaPredicted RBP3.39□□□□□ -1.87
UBE2W-202ENST00000422906 NUTM2AQ8IVF1 878 aaPredicted RBP3.39□□□□□ -1.87
UBE2W-202ENST00000422906 MARCH10Q8NA82 808 aaPredicted RBP3.39□□□□□ -1.87
UBE2W-202ENST00000422906 TOMM70O94826 608 aa3.39□□□□□ -1.87
UBE2W-202ENST00000422906 FAM9AQ8IZU1 332 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms