RNA–Protein interactions for RNA: ENST00000419940.5

TGFA-204, Transcript of transforming growth factor alpha, humanhuman

TSL 5

Gene TGFA, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-204ENST00000419940 PARP4Q9UKK3 1724 aaKnown RBP17.31■□□□□ 0.36
TGFA-204ENST00000419940 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
TGFA-204ENST00000419940 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
TGFA-204ENST00000419940 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
TGFA-204ENST00000419940 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
TGFA-204ENST00000419940 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
TGFA-204ENST00000419940 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
TGFA-204ENST00000419940 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
TGFA-204ENST00000419940 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
TGFA-204ENST00000419940 FCHSD2O94868 740 aa17.28■□□□□ 0.36
TGFA-204ENST00000419940 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
TGFA-204ENST00000419940 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
TGFA-204ENST00000419940 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
TGFA-204ENST00000419940 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
TGFA-204ENST00000419940 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
TGFA-204ENST00000419940 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
TGFA-204ENST00000419940 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
TGFA-204ENST00000419940 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
TGFA-204ENST00000419940 SPG7Q9UQ90 795 aa17.26■□□□□ 0.35
TGFA-204ENST00000419940 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
TGFA-204ENST00000419940 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
TGFA-204ENST00000419940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.35
TGFA-204ENST00000419940 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
TGFA-204ENST00000419940 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
TGFA-204ENST00000419940 CYP27B1O15528 508 aa17.24■□□□□ 0.35
TGFA-204ENST00000419940 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
TGFA-204ENST00000419940 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
TGFA-204ENST00000419940 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
TGFA-204ENST00000419940 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
TGFA-204ENST00000419940 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
TGFA-204ENST00000419940 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
TGFA-204ENST00000419940 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
TGFA-204ENST00000419940 PHKG2P15735 406 aa17.21■□□□□ 0.35
TGFA-204ENST00000419940 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
TGFA-204ENST00000419940 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
TGFA-204ENST00000419940 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
TGFA-204ENST00000419940 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
TGFA-204ENST00000419940 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
TGFA-204ENST00000419940 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
TGFA-204ENST00000419940 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
TGFA-204ENST00000419940 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
TGFA-204ENST00000419940 NEFMP07197 916 aa17.17■□□□□ 0.34
TGFA-204ENST00000419940 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
TGFA-204ENST00000419940 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
TGFA-204ENST00000419940 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
TGFA-204ENST00000419940 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
TGFA-204ENST00000419940 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
TGFA-204ENST00000419940 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
TGFA-204ENST00000419940 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
TGFA-204ENST00000419940 KCNQ2O43526 872 aa17.15■□□□□ 0.34
TGFA-204ENST00000419940 BCL9O00512 1426 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 TRIM37O94972 964 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
TGFA-204ENST00000419940 SBF2Q86WG5 1849 aa17.14■□□□□ 0.33
TGFA-204ENST00000419940 APAF1O14727 1248 aa17.13■□□□□ 0.33
TGFA-204ENST00000419940 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
TGFA-204ENST00000419940 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
TGFA-204ENST00000419940 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
TGFA-204ENST00000419940 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
TGFA-204ENST00000419940 DCAF5Q96JK2 942 aa17.13■□□□□ 0.33
TGFA-204ENST00000419940 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
TGFA-204ENST00000419940 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
TGFA-204ENST00000419940 RIPK4P57078 832 aa17.12■□□□□ 0.33
TGFA-204ENST00000419940 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
TGFA-204ENST00000419940 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
TGFA-204ENST00000419940 MAP3K5Q99683 1374 aa17.12■□□□□ 0.33
TGFA-204ENST00000419940 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
TGFA-204ENST00000419940 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
TGFA-204ENST00000419940 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
TGFA-204ENST00000419940 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
TGFA-204ENST00000419940 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
TGFA-204ENST00000419940 MCM10Q7L590 875 aa17.1■□□□□ 0.33
TGFA-204ENST00000419940 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■□□□ 13.1
TGFA-204ENST00000419940 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
TGFA-204ENST00000419940 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
TGFA-204ENST00000419940 SCN11AQ9UI33 1791 aa17.09■□□□□ 0.33
TGFA-204ENST00000419940 ITGB4P16144 1822 aa17.08■□□□□ 0.33
TGFA-204ENST00000419940 VIRMAQ69YN4 1812 aaKnown RBP17.08■□□□□ 0.33
TGFA-204ENST00000419940 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
TGFA-204ENST00000419940 CABP4P57796 275 aa17.08■□□□□ 0.32
TGFA-204ENST00000419940 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
TGFA-204ENST00000419940 PIGBQ92521 554 aa17.08■□□□□ 0.32
TGFA-204ENST00000419940 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
TGFA-204ENST00000419940 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
TGFA-204ENST00000419940 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
TGFA-204ENST00000419940 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
TGFA-204ENST00000419940 APBA3O96018 575 aa17.06■□□□□ 0.32
TGFA-204ENST00000419940 THUMPD2Q9BTF0 503 aaKnown RBP17.06■□□□□ 0.32
TGFA-204ENST00000419940 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
TGFA-204ENST00000419940 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
TGFA-204ENST00000419940 CEMIPQ8WUJ3 1361 aa17.05■□□□□ 0.32
TGFA-204ENST00000419940 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
TGFA-204ENST00000419940 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
TGFA-204ENST00000419940 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
TGFA-204ENST00000419940 BTAF1O14981 1849 aa17.04■□□□□ 0.32
TGFA-204ENST00000419940 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
TGFA-204ENST00000419940 TEFQ10587 303 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms