RNA–Protein interactions for RNA: ENST00000419093.5

LSS-203, Transcript of lanosterol synthase, humanhuman

TSL 3

Gene LSS, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-203ENST00000419093 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
LSS-203ENST00000419093 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 NBPF14Q5TI25 921 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
LSS-203ENST00000419093 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
LSS-203ENST00000419093 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
LSS-203ENST00000419093 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
LSS-203ENST00000419093 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
LSS-203ENST00000419093 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
LSS-203ENST00000419093 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
LSS-203ENST00000419093 COL18A1P39060 1754 aa13.07□□□□□ -0.32
LSS-203ENST00000419093 KCNQ2O43526 872 aa13.07□□□□□ -0.32
LSS-203ENST00000419093 HMOX1P09601 288 aa13.07□□□□□ -0.32
LSS-203ENST00000419093 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
LSS-203ENST00000419093 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
LSS-203ENST00000419093 KDRP35968 1356 aa13.07□□□□□ -0.32
LSS-203ENST00000419093 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
LSS-203ENST00000419093 CRB1P82279 1406 aa13.06□□□□□ -0.32
LSS-203ENST00000419093 APBA3O96018 575 aa13.06□□□□□ -0.32
LSS-203ENST00000419093 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
LSS-203ENST00000419093 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
LSS-203ENST00000419093 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
LSS-203ENST00000419093 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
LSS-203ENST00000419093 TRIM37O94972 964 aa13.05□□□□□ -0.32
LSS-203ENST00000419093 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
LSS-203ENST00000419093 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
LSS-203ENST00000419093 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
LSS-203ENST00000419093 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
LSS-203ENST00000419093 CHD4Q14839 1912 aa13.04□□□□□ -0.32
LSS-203ENST00000419093 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
LSS-203ENST00000419093 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
LSS-203ENST00000419093 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
LSS-203ENST00000419093 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
LSS-203ENST00000419093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
LSS-203ENST00000419093 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
LSS-203ENST00000419093 IL2RBP14784 551 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
LSS-203ENST00000419093 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
LSS-203ENST00000419093 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.32
LSS-203ENST00000419093 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.32
LSS-203ENST00000419093 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
LSS-203ENST00000419093 CCDC146Q8IYE0 955 aa13.02□□□□□ -0.33
LSS-203ENST00000419093 APAF1O14727 1248 aa13.01□□□□□ -0.33
LSS-203ENST00000419093 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
LSS-203ENST00000419093 RGPD5Q99666 1765 aa13□□□□□ -0.33
LSS-203ENST00000419093 C1QTNF8P60827 252 aa13□□□□□ -0.33
LSS-203ENST00000419093 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
LSS-203ENST00000419093 NFE2L2Q16236 605 aa13□□□□□ -0.33
LSS-203ENST00000419093 EXOC5O00471 708 aa12.99□□□□□ -0.33
LSS-203ENST00000419093 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
LSS-203ENST00000419093 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
LSS-203ENST00000419093 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
LSS-203ENST00000419093 ZCRB1Q8TBF4 217 aaKnown RBP12.99□□□□□ -0.33
LSS-203ENST00000419093 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
LSS-203ENST00000419093 UTRNP46939 3433 aa12.98□□□□□ -0.33
LSS-203ENST00000419093 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
LSS-203ENST00000419093 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
LSS-203ENST00000419093 RIPK4P57078 832 aa12.98□□□□□ -0.33
LSS-203ENST00000419093 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
LSS-203ENST00000419093 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
LSS-203ENST00000419093 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
LSS-203ENST00000419093 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
LSS-203ENST00000419093 PLSCR1O15162 318 aa12.97□□□□□ -0.33
LSS-203ENST00000419093 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
LSS-203ENST00000419093 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
LSS-203ENST00000419093 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
LSS-203ENST00000419093 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
LSS-203ENST00000419093 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
LSS-203ENST00000419093 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
LSS-203ENST00000419093 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
LSS-203ENST00000419093 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
LSS-203ENST00000419093 DDB1Q16531 1140 aa12.96□□□□□ -0.33
LSS-203ENST00000419093 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
LSS-203ENST00000419093 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.34
LSS-203ENST00000419093 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
LSS-203ENST00000419093 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
LSS-203ENST00000419093 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
LSS-203ENST00000419093 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
LSS-203ENST00000419093 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
LSS-203ENST00000419093 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
LSS-203ENST00000419093 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
LSS-203ENST00000419093 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
LSS-203ENST00000419093 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
LSS-203ENST00000419093 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
LSS-203ENST00000419093 MEGF6O75095 1541 aa12.93□□□□□ -0.34
LSS-203ENST00000419093 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
LSS-203ENST00000419093 PHKG2P15735 406 aa12.92□□□□□ -0.34
LSS-203ENST00000419093 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
LSS-203ENST00000419093 PTGER2P43116 358 aa12.91□□□□□ -0.34
LSS-203ENST00000419093 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
LSS-203ENST00000419093 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms