RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 SULT6B1Q6IMI4 303 aa11.34□□□□□ -0.59
CNOT9-203ENST00000418808 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
CNOT9-203ENST00000418808 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
CNOT9-203ENST00000418808 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
CNOT9-203ENST00000418808 OVOS2A0A0G2JMS6 1433 aa11.34□□□□□ -0.59
CNOT9-203ENST00000418808 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
CNOT9-203ENST00000418808 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
CNOT9-203ENST00000418808 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
CNOT9-203ENST00000418808 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
CNOT9-203ENST00000418808 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
CNOT9-203ENST00000418808 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
CNOT9-203ENST00000418808 CYP27B1O15528 508 aa11.31□□□□□ -0.6
CNOT9-203ENST00000418808 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
CNOT9-203ENST00000418808 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
CNOT9-203ENST00000418808 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
CNOT9-203ENST00000418808 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
CNOT9-203ENST00000418808 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
CNOT9-203ENST00000418808 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
CNOT9-203ENST00000418808 EVA1CP58658 441 aa11.3□□□□□ -0.6
CNOT9-203ENST00000418808 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
CNOT9-203ENST00000418808 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
CNOT9-203ENST00000418808 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
CNOT9-203ENST00000418808 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
CNOT9-203ENST00000418808 FCHSD2O94868 740 aa11.29□□□□□ -0.6
CNOT9-203ENST00000418808 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
CNOT9-203ENST00000418808 MARCH10Q8NA82 808 aaPredicted RBP11.29□□□□□ -0.6
CNOT9-203ENST00000418808 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
CNOT9-203ENST00000418808 BRWD3Q6RI45 1802 aa11.29□□□□□ -0.6
CNOT9-203ENST00000418808 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
CNOT9-203ENST00000418808 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-203ENST00000418808 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
CNOT9-203ENST00000418808 IL2RBP14784 551 aa11.28□□□□□ -0.6
CNOT9-203ENST00000418808 PTF1AQ7RTS3 328 aa11.28□□□□□ -0.6
CNOT9-203ENST00000418808 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
CNOT9-203ENST00000418808 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
CNOT9-203ENST00000418808 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
CNOT9-203ENST00000418808 PLEKHG2Q9H7P9 1386 aa11.27□□□□□ -0.61
CNOT9-203ENST00000418808 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
CNOT9-203ENST00000418808 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
CNOT9-203ENST00000418808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
CNOT9-203ENST00000418808 APAF1O14727 1248 aa11.25□□□□□ -0.61
CNOT9-203ENST00000418808 PHKG2P15735 406 aa11.25□□□□□ -0.61
CNOT9-203ENST00000418808 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
CNOT9-203ENST00000418808 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
CNOT9-203ENST00000418808 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
CNOT9-203ENST00000418808 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
CNOT9-203ENST00000418808 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
CNOT9-203ENST00000418808 TMPOP42166 694 aaKnown RBP11.24□□□□□ -0.61
CNOT9-203ENST00000418808 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
CNOT9-203ENST00000418808 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
CNOT9-203ENST00000418808 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
CNOT9-203ENST00000418808 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
CNOT9-203ENST00000418808 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
CNOT9-203ENST00000418808 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
CNOT9-203ENST00000418808 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
CNOT9-203ENST00000418808 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
CNOT9-203ENST00000418808 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
CNOT9-203ENST00000418808 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
CNOT9-203ENST00000418808 BCL9O00512 1426 aa11.23□□□□□ -0.61
CNOT9-203ENST00000418808 MRC1P22897 1456 aa11.22□□□□□ -0.61
CNOT9-203ENST00000418808 NFE2L2Q16236 605 aa11.22□□□□□ -0.61
CNOT9-203ENST00000418808 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
CNOT9-203ENST00000418808 SIPA1L3O60292 1781 aaPredicted RBP11.21□□□□□ -0.61
CNOT9-203ENST00000418808 CAPN15O75808 1086 aa11.21□□□□□ -0.61
CNOT9-203ENST00000418808 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
CNOT9-203ENST00000418808 DDB1Q16531 1140 aa11.21□□□□□ -0.61
CNOT9-203ENST00000418808 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
CNOT9-203ENST00000418808 KCNQ2O43526 872 aa11.2□□□□□ -0.62
CNOT9-203ENST00000418808 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
CNOT9-203ENST00000418808 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
CNOT9-203ENST00000418808 SCN11AQ9UI33 1791 aa11.2□□□□□ -0.62
CNOT9-203ENST00000418808 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
CNOT9-203ENST00000418808 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
CNOT9-203ENST00000418808 EXOC5O00471 708 aa11.19□□□□□ -0.62
CNOT9-203ENST00000418808 AMOTQ4VCS5 1084 aa11.19□□□□□ -0.62
CNOT9-203ENST00000418808 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
CNOT9-203ENST00000418808 MCM10Q7L590 875 aa11.19□□□□□ -0.62
CNOT9-203ENST00000418808 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
CNOT9-203ENST00000418808 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
CNOT9-203ENST00000418808 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
CNOT9-203ENST00000418808 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
CNOT9-203ENST00000418808 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
CNOT9-203ENST00000418808 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
CNOT9-203ENST00000418808 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
CNOT9-203ENST00000418808 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
CNOT9-203ENST00000418808 KCNQ3O43525 872 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 ZNF853P0CG23 659 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 RIPK4P57078 832 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
CNOT9-203ENST00000418808 KRT27Q7Z3Y8 459 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 PAPPAQ13219 1627 aa11.17□□□□□ -0.62
CNOT9-203ENST00000418808 ITGB4P16144 1822 aa11.16□□□□□ -0.62
CNOT9-203ENST00000418808 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
CNOT9-203ENST00000418808 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
CNOT9-203ENST00000418808 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
CNOT9-203ENST00000418808 GAS2L2Q8NHY3 880 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms