RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 TMX1Q9H3N1 280 aa12.08□□□□□ -0.48
SATB1-204ENST00000417717 CPLX1O14810 134 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 CASQ1P31415 396 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 SH2D4BQ5SQS7 431 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 FYB1O15117 783 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 NEK4P51957 841 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 TUBB4BP68371 445 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 CFAP57Q96MR6 1250 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 KIF5CO60282 957 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
SATB1-204ENST00000417717 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
SATB1-204ENST00000417717 CEP112Q8N8E3 955 aa12.07□□□□□ -0.48
SATB1-204ENST00000417717 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
SATB1-204ENST00000417717 DACH1Q9UI36 760 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 LNPKQ9C0E8 428 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 FEZ2Q9UHY8 353 aaPredicted RBP12.06□□□□□ -0.48
SATB1-204ENST00000417717 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
SATB1-204ENST00000417717 TUBBP07437 444 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 SNW1Q13573 536 aaKnown RBP12.05□□□□□ -0.48
SATB1-204ENST00000417717 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 LUC7L2Q9Y383 392 aaKnown RBP12.05□□□□□ -0.48
SATB1-204ENST00000417717 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
SATB1-204ENST00000417717 EPB41L2O43491 1005 aaKnown RBP12.05□□□□□ -0.48
SATB1-204ENST00000417717 ZBTB17Q13105 803 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 WHAMMP3Q1A5X7 153 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 MYRIPQ8NFW9 859 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
SATB1-204ENST00000417717 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 CCDC6Q16204 474 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 LMNTD2Q8IXW0 634 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 NUCKS1Q9H1E3 243 aaKnown RBP12.04□□□□□ -0.48
SATB1-204ENST00000417717 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 ZNF396Q96N95 335 aaPredicted RBP12.04□□□□□ -0.48
SATB1-204ENST00000417717 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 ADCY5O95622 1261 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 CLIP2Q9UDT6 1046 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
SATB1-204ENST00000417717 PCF11O94913 1555 aaKnown RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 RLBP1P12271 317 aa12.03□□□□□ -0.48
SATB1-204ENST00000417717 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
SATB1-204ENST00000417717 B4GALNT4Q76KP1 1039 aa12.03□□□□□ -0.48
SATB1-204ENST00000417717 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
SATB1-204ENST00000417717 CAVIN2O95810 425 aa12.03□□□□□ -0.48
SATB1-204ENST00000417717 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
SATB1-204ENST00000417717 A6NNZ2 444 aa12.02□□□□□ -0.48
SATB1-204ENST00000417717 TUBB8Q3ZCM7 444 aa12.02□□□□□ -0.48
SATB1-204ENST00000417717 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.48
SATB1-204ENST00000417717 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.48
SATB1-204ENST00000417717 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 SAFBQ15424 915 aaKnown RBP eCLIP12.02□□□□□ -0.49
SATB1-204ENST00000417717 PAF1Q8N7H5 531 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 ANKRD62A6NC57 917 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
SATB1-204ENST00000417717 INPP5BP32019 993 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.49
SATB1-204ENST00000417717 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
SATB1-204ENST00000417717 JMYQ8N9B5 988 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
SATB1-204ENST00000417717 BCL2L13Q9BXK5 485 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 PSMA5P28066 241 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 SYCP1Q15431 976 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
SATB1-204ENST00000417717 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 MARCH6O60337 910 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 VEZTQ9HBM0 779 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 GCOM1H8Y6P7 765 aaPredicted RBP12.01□□□□□ -0.49
SATB1-204ENST00000417717 MYZAPP0CAP1 466 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 MCM6Q14566 821 aa12.01□□□□□ -0.49
SATB1-204ENST00000417717 ROCK1Q13464 1354 aa12□□□□□ -0.49
SATB1-204ENST00000417717 CCDC160A6NGH7 325 aa12□□□□□ -0.49
SATB1-204ENST00000417717 OPA1O60313 960 aa12□□□□□ -0.49
SATB1-204ENST00000417717 LRRFIP1Q32MZ4 808 aaKnown RBP12□□□□□ -0.49
SATB1-204ENST00000417717 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
SATB1-204ENST00000417717 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
SATB1-204ENST00000417717 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
SATB1-204ENST00000417717 ANKS4BQ8N8V4 417 aa12□□□□□ -0.49
SATB1-204ENST00000417717 CCDC97Q96F63 343 aaPredicted RBP12□□□□□ -0.49
SATB1-204ENST00000417717 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
SATB1-204ENST00000417717 TRMT1Q9NXH9 659 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms