RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 TSPYL6Q8N831 410 aa24.45■■□□□ 1.5
PPM1N-206ENST00000415077 CRB1P82279 1406 aa24.44■■□□□ 1.5
PPM1N-206ENST00000415077 ERBB3P21860 1342 aa24.44■■□□□ 1.5
PPM1N-206ENST00000415077 ELL2O00472 640 aaPredicted RBP24.43■■□□□ 1.5
PPM1N-206ENST00000415077 TWISTNBQ3B726 338 aaPredicted RBP24.43■■□□□ 1.5
PPM1N-206ENST00000415077 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
PPM1N-206ENST00000415077 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
PPM1N-206ENST00000415077 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
PPM1N-206ENST00000415077 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
PPM1N-206ENST00000415077 NCAPD2Q15021 1401 aa24.41■■□□□ 1.5
PPM1N-206ENST00000415077 CLUAP1Q96AJ1 413 aa24.41■■□□□ 1.5
PPM1N-206ENST00000415077 MS4A1P11836 297 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 RLBP1P12271 317 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 NOB1Q9ULX3 412 aaKnown RBP24.4■■□□□ 1.5
PPM1N-206ENST00000415077 TNNQ9UQP3 1299 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 CRYBG1Q9Y4K1 1723 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 KIF16BQ96L93 1317 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 CHRNA2Q15822 529 aa24.4■■□□□ 1.5
PPM1N-206ENST00000415077 CPDO75976 1380 aa24.39■■□□□ 1.5
PPM1N-206ENST00000415077 KIAA0232Q92628 1395 aa24.39■■□□□ 1.5
PPM1N-206ENST00000415077 IPO8O15397 1037 aaKnown RBP24.39■■□□□ 1.49
PPM1N-206ENST00000415077 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
PPM1N-206ENST00000415077 FTSJ3Q8IY81 847 aaKnown RBP24.39■■□□□ 1.49
PPM1N-206ENST00000415077 BRPF1P55201 1214 aaPredicted RBP24.38■■□□□ 1.49
PPM1N-206ENST00000415077 AMOTQ4VCS5 1084 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 ATF7IPQ6VMQ6 1270 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 DZIP1LQ8IYY4 767 aaKnown RBP24.38■■□□□ 1.49
PPM1N-206ENST00000415077 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 MIS18AQ9NYP9 233 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 TRIM27P14373 513 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
PPM1N-206ENST00000415077 COL18A1P39060 1754 aa24.37■■□□□ 1.49
PPM1N-206ENST00000415077 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
PPM1N-206ENST00000415077 HAP1P54257 671 aaPredicted RBP24.36■■□□□ 1.49
PPM1N-206ENST00000415077 CAMTA1Q9Y6Y1 1673 aa24.36■■□□□ 1.49
PPM1N-206ENST00000415077 NHSL1Q5SYE7 1610 aa24.36■■□□□ 1.49
PPM1N-206ENST00000415077 ABCC6O95255 1503 aa24.36■■□□□ 1.49
PPM1N-206ENST00000415077 CSB-PGBD3P0DP91 1061 aa24.36■■□□□ 1.49
PPM1N-206ENST00000415077 MRPL50Q8N5N7 158 aaKnown RBP24.34■■□□□ 1.49
PPM1N-206ENST00000415077 KRT24Q2M2I5 525 aa24.34■■□□□ 1.49
PPM1N-206ENST00000415077 ZNF530Q6P9A1 599 aaPredicted RBP24.34■■□□□ 1.49
PPM1N-206ENST00000415077 TSHZ2Q9NRE2 1034 aa24.34■■□□□ 1.49
PPM1N-206ENST00000415077 AAMPQ13685 434 aa24.33■■□□□ 1.49
PPM1N-206ENST00000415077 MVPQ14764 893 aaKnown RBP24.33■■□□□ 1.49
PPM1N-206ENST00000415077 AKAP4Q5JQC9 854 aa24.33■■□□□ 1.49
PPM1N-206ENST00000415077 LRRC37A3O60309 1634 aa24.33■■□□□ 1.49
PPM1N-206ENST00000415077 PRDM11Q9NQV5 511 aa24.33■■□□□ 1.48
PPM1N-206ENST00000415077 TAF7Q15545 349 aaPredicted RBP24.32■■□□□ 1.48
PPM1N-206ENST00000415077 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
PPM1N-206ENST00000415077 LMO7Q8WWI1 1683 aa24.31■■□□□ 1.48
PPM1N-206ENST00000415077 TCERG1O14776 1098 aaKnown RBP24.31■■□□□ 1.48
PPM1N-206ENST00000415077 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
PPM1N-206ENST00000415077 RAPGEF4Q8WZA2 1011 aa24.31■■□□□ 1.48
PPM1N-206ENST00000415077 BABAM1Q9NWV8 329 aa24.31■■□□□ 1.48
PPM1N-206ENST00000415077 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
PPM1N-206ENST00000415077 ARHGAP45Q92619 1136 aa24.3■■□□□ 1.48
PPM1N-206ENST00000415077 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
PPM1N-206ENST00000415077 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
PPM1N-206ENST00000415077 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
PPM1N-206ENST00000415077 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
PPM1N-206ENST00000415077 FAM208AQ9UK61 1670 aaKnown RBP24.27■■□□□ 1.48
PPM1N-206ENST00000415077 MPRIPQ6WCQ1 1025 aa24.27■■□□□ 1.48
PPM1N-206ENST00000415077 ROBO1Q9Y6N7 1651 aa24.26■■□□□ 1.47
PPM1N-206ENST00000415077 TATP17735 454 aaPredicted RBP24.26■■□□□ 1.47
PPM1N-206ENST00000415077 DDX19BQ9UMR2 479 aa24.26■■□□□ 1.47
PPM1N-206ENST00000415077 TMEM57Q8N5G2 664 aa24.25■■□□□ 1.47
PPM1N-206ENST00000415077 TEFQ10587 303 aa24.24■■□□□ 1.47
PPM1N-206ENST00000415077 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
PPM1N-206ENST00000415077 RNMTO43148 476 aaKnown RBP24.23■■□□□ 1.47
PPM1N-206ENST00000415077 SPG7Q9UQ90 795 aa24.23■■□□□ 1.47
PPM1N-206ENST00000415077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.22■■□□□ 1.47
PPM1N-206ENST00000415077 WDR17Q8IZU2 1322 aa24.22■■□□□ 1.47
PPM1N-206ENST00000415077 API5Q9BZZ5 524 aaKnown RBP24.22■■□□□ 1.47
PPM1N-206ENST00000415077 MEGF6O75095 1541 aa24.21■■□□□ 1.47
PPM1N-206ENST00000415077 IGHDP01880 384 aa24.2■■□□□ 1.46
PPM1N-206ENST00000415077 TOM1L2Q6ZVM7 507 aa24.2■■□□□ 1.46
PPM1N-206ENST00000415077 PCDHB15Q9Y5E8 787 aa24.2■■□□□ 1.46
PPM1N-206ENST00000415077 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
PPM1N-206ENST00000415077 SOS1Q07889 1333 aaPredicted RBP24.2■■□□□ 1.46
PPM1N-206ENST00000415077 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
PPM1N-206ENST00000415077 PLEKHG2Q9H7P9 1386 aa24.19■■□□□ 1.46
PPM1N-206ENST00000415077 SLC4A2P04920 1241 aa24.19■■□□□ 1.46
PPM1N-206ENST00000415077 AHDC1Q5TGY3 1603 aaPredicted RBP24.19■■□□□ 1.46
PPM1N-206ENST00000415077 BTBD11A6QL63 1104 aa24.18■■□□□ 1.46
PPM1N-206ENST00000415077 ABCC4O15439 1325 aa24.18■■□□□ 1.46
PPM1N-206ENST00000415077 EVA1CP58658 441 aa24.17■■□□□ 1.46
PPM1N-206ENST00000415077 CCDC30Q5VVM6 783 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 PTPRCP08575 1304 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 PHKG2P15735 406 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 IFNL2Q8IZJ0 200 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 STK31Q9BXU1 1019 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 ZBTB40Q9NUA8 1239 aa24.16■■□□□ 1.46
PPM1N-206ENST00000415077 VIRMAQ69YN4 1812 aaKnown RBP24.15■■□□□ 1.46
PPM1N-206ENST00000415077 STRN4Q9NRL3 753 aa24.15■■□□□ 1.46
PPM1N-206ENST00000415077 EIF4A1P60842 406 aaKnown RBP24.14■■□□□ 1.46
PPM1N-206ENST00000415077 CHMP4BQ9H444 224 aaKnown RBP24.14■■□□□ 1.46
PPM1N-206ENST00000415077 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.45
PPM1N-206ENST00000415077 TOM1O60784 492 aa24.13■■□□□ 1.45
PPM1N-206ENST00000415077 CARD10Q9BWT7 1032 aa24.13■■□□□ 1.45
PPM1N-206ENST00000415077 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms