RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 PPP4R3BQ5MIZ7 849 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 RSBN1LQ6PCB5 846 aaPredicted RBP7.14□□□□□ -1.27
VPS41-205ENST00000414632 ADAMTS13Q76LX8 1427 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 ZNF710Q8N1W2 664 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 FBXO41Q8TF61 875 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 SETBP1Q9Y6X0 1596 aa7.14□□□□□ -1.27
VPS41-205ENST00000414632 XRN1Q8IZH2 1706 aaKnown RBP7.13□□□□□ -1.27
VPS41-205ENST00000414632 SPATA31E1Q6ZUB1 1445 aa7.13□□□□□ -1.27
VPS41-205ENST00000414632 MOXD2PA6NHM9 499 aa7.13□□□□□ -1.27
VPS41-205ENST00000414632 DNAJB2P25686 324 aa7.13□□□□□ -1.27
VPS41-205ENST00000414632 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
VPS41-205ENST00000414632 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS41-205ENST00000414632 GDPD2Q9HCC8 539 aa7.13□□□□□ -1.27
VPS41-205ENST00000414632 ALKQ9UM73 1620 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 IQSEC2Q5JU85 1478 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PSDA5PKW4 1024 aaPredicted RBP7.12□□□□□ -1.27
VPS41-205ENST00000414632 PPP1R3GB7ZBB8 358 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 SNPHO15079 494 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 NDUFV2P19404 249 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PTPREP23469 700 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 QPCTQ16769 361 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PACS2Q86VP3 889 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 MTMR14Q8NCE2 650 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 TATDN2Q93075 761 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PNMA3Q9UL41 463 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PCDHB15Q9Y5E8 787 aa7.12□□□□□ -1.27
VPS41-205ENST00000414632 PTPRUQ92729 1446 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 ANKRD30BQ9BXX2 1392 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 NALCNQ8IZF0 1738 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 NBPF26B4DH59 902 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 AP1G2O75843 785 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 GJA5P36382 358 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 PIP4K2BP78356 416 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 TMEM134Q9H6X4 195 aa7.11□□□□□ -1.27
VPS41-205ENST00000414632 NKTRP30414 1462 aaKnown RBP7.11□□□□□ -1.27
VPS41-205ENST00000414632 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.1□□□□□ -1.27
VPS41-205ENST00000414632 METP08581 1390 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 TMEM94Q12767 1356 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 ADGRF5Q8IZF2 1346 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 ACIN1Q9UKV3 1341 aaKnown RBP7.1□□□□□ -1.27
VPS41-205ENST00000414632 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 TRIM6-TRIM34B2RNG4 842 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 LILRB3O75022 631 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 KCNA6P17658 529 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 RTL5Q5HYW3 569 aaPredicted RBP7.1□□□□□ -1.27
VPS41-205ENST00000414632 ASXL1Q8IXJ9 1541 aa7.1□□□□□ -1.27
VPS41-205ENST00000414632 NUTM2BA6NNL0 878 aaPredicted RBP7.09□□□□□ -1.27
VPS41-205ENST00000414632 NUTM2EB1AL46 878 aaPredicted RBP7.09□□□□□ -1.27
VPS41-205ENST00000414632 SMAPO00193 183 aa7.09□□□□□ -1.27
VPS41-205ENST00000414632 NUTM2AQ8IVF1 878 aaPredicted RBP7.09□□□□□ -1.27
VPS41-205ENST00000414632 WWC1Q8IX03 1113 aa7.09□□□□□ -1.27
VPS41-205ENST00000414632 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
VPS41-205ENST00000414632 TBX22Q9Y458 520 aa7.09□□□□□ -1.27
VPS41-205ENST00000414632 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.27
VPS41-205ENST00000414632 RPGRIP1LQ68CZ1 1315 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 KNDC1Q76NI1 1749 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 KDM4AO75164 1064 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 ABL2P42684 1182 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 PRM3Q9NNZ6 103 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 AMOTL2Q9Y2J4 779 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 LAMC1P11047 1609 aa7.08□□□□□ -1.28
VPS41-205ENST00000414632 MYOM2P54296 1465 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 SOCS7O14512 581 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 TMEM132EQ6IEE7 984 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 CABLES1Q8TDN4 633 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 SIN3AQ96ST3 1273 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 PIK3C2GO75747 1445 aa7.07□□□□□ -1.28
VPS41-205ENST00000414632 DHX57Q6P158 1386 aaKnown RBP7.07□□□□□ -1.28
VPS41-205ENST00000414632 PROX2Q3B8N5 592 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 PRPF38BQ5VTL8 546 aaKnown RBP7.06□□□□□ -1.28
VPS41-205ENST00000414632 DCAF11Q8TEB1 546 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 PCGF6Q9BYE7 350 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 STK26Q9P289 416 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 PIK3R4Q99570 1358 aa7.06□□□□□ -1.28
VPS41-205ENST00000414632 RGPD8O14715 1765 aaPredicted RBP7.05□□□□□ -1.28
VPS41-205ENST00000414632 NRXN1Q9ULB1 1477 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 PHLPP1O60346 1717 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 TOM1O60784 492 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 USP17L8P0C7I0 530 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 GCGRP47871 477 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 USP46P62068 366 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 NEUROD1Q13562 356 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 CALR3Q96L12 384 aaKnown RBP7.05□□□□□ -1.28
VPS41-205ENST00000414632 TRAIPQ9BWF2 469 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 MSH6P52701 1360 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 ROBO2Q9HCK4 1378 aa7.05□□□□□ -1.28
VPS41-205ENST00000414632 ARHGEF28Q8N1W1 1705 aaKnown RBP7.04□□□□□ -1.28
VPS41-205ENST00000414632 POM121CA8CG34 1229 aa7.04□□□□□ -1.28
VPS41-205ENST00000414632 FDX1P10109 184 aa7.04□□□□□ -1.28
VPS41-205ENST00000414632 HSPA1LP34931 641 aa7.04□□□□□ -1.28
VPS41-205ENST00000414632 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
VPS41-205ENST00000414632 KCNK17Q96T54 332 aa7.04□□□□□ -1.28
VPS41-205ENST00000414632 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
VPS41-205ENST00000414632 YTHDC2Q9H6S0 1430 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms