RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 CDCA7Q9BWT1 371 aaPredicted RBP23.69■■□□□ 1.38
SBDS-202ENST00000414306 OVOS2A0A0G2JMS6 1433 aa23.69■■□□□ 1.38
SBDS-202ENST00000414306 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
SBDS-202ENST00000414306 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
SBDS-202ENST00000414306 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
SBDS-202ENST00000414306 EXOC5O00471 708 aa23.67■■□□□ 1.38
SBDS-202ENST00000414306 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
SBDS-202ENST00000414306 KRT27Q7Z3Y8 459 aa23.67■■□□□ 1.38
SBDS-202ENST00000414306 KDRP35968 1356 aa23.67■■□□□ 1.38
SBDS-202ENST00000414306 DDX54Q8TDD1 881 aaKnown RBP23.65■■□□□ 1.38
SBDS-202ENST00000414306 EP400Q96L91 3159 aa23.65■■□□□ 1.38
SBDS-202ENST00000414306 ZCRB1Q8TBF4 217 aaKnown RBP23.64■■□□□ 1.38
SBDS-202ENST00000414306 WDR43Q15061 677 aaKnown RBP eCLIP23.64■■□□□ 1.37
SBDS-202ENST00000414306 MIER1Q8N108 512 aa23.64■■□□□ 1.37
SBDS-202ENST00000414306 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
SBDS-202ENST00000414306 MARCH10Q8NA82 808 aaPredicted RBP23.62■■□□□ 1.37
SBDS-202ENST00000414306 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
SBDS-202ENST00000414306 KAT6BQ8WYB5 2073 aa23.6■■□□□ 1.37
SBDS-202ENST00000414306 SPG7Q9UQ90 795 aa23.59■■□□□ 1.37
SBDS-202ENST00000414306 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.37
SBDS-202ENST00000414306 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.37
SBDS-202ENST00000414306 PLEKHO1Q53GL0 409 aaPredicted RBP23.58■■□□□ 1.36
SBDS-202ENST00000414306 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.36
SBDS-202ENST00000414306 FCHSD2O94868 740 aa23.57■■□□□ 1.36
SBDS-202ENST00000414306 ZNF530Q6P9A1 599 aaPredicted RBP23.57■■□□□ 1.36
SBDS-202ENST00000414306 CCDC146Q8IYE0 955 aa23.57■■□□□ 1.36
SBDS-202ENST00000414306 PHACTR3Q96KR7 559 aa23.57■■□□□ 1.36
SBDS-202ENST00000414306 CYP27B1O15528 508 aa23.56■■□□□ 1.36
SBDS-202ENST00000414306 DOT1LQ8TEK3 1739 aa23.56■■□□□ 1.36
SBDS-202ENST00000414306 SBF2Q86WG5 1849 aa23.55■■□□□ 1.36
SBDS-202ENST00000414306 MTHFSDQ2M296 383 aaKnown RBP23.54■■□□□ 1.36
SBDS-202ENST00000414306 AMOTQ4VCS5 1084 aa23.54■■□□□ 1.36
SBDS-202ENST00000414306 VIRMAQ69YN4 1812 aaKnown RBP23.54■■□□□ 1.36
SBDS-202ENST00000414306 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
SBDS-202ENST00000414306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.54■■□□□ 1.36
SBDS-202ENST00000414306 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
SBDS-202ENST00000414306 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
SBDS-202ENST00000414306 PHKG2P15735 406 aa23.52■■□□□ 1.36
SBDS-202ENST00000414306 ACSBG1Q96GR2 724 aa23.52■■□□□ 1.36
SBDS-202ENST00000414306 PLEKHF1Q96S99 279 aa23.52■■□□□ 1.36
SBDS-202ENST00000414306 DLG5Q8TDM6 1919 aa23.52■■□□□ 1.36
SBDS-202ENST00000414306 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
SBDS-202ENST00000414306 C1orf141Q5JVX7 400 aa23.51■■□□□ 1.35
SBDS-202ENST00000414306 FAM196AQ6ZSG2 479 aa23.51■■□□□ 1.35
SBDS-202ENST00000414306 IFNL2Q8IZJ0 200 aa23.51■■□□□ 1.35
SBDS-202ENST00000414306 SENP3-EIF4A1A0A087X0R7 540 aa23.5■■□□□ 1.35
SBDS-202ENST00000414306 NEFMP07197 916 aa23.5■■□□□ 1.35
SBDS-202ENST00000414306 PLEKHG2Q9H7P9 1386 aa23.5■■□□□ 1.35
SBDS-202ENST00000414306 CCER2I3L3R5 266 aa23.49■■□□□ 1.35
SBDS-202ENST00000414306 PNNQ9H307 717 aaKnown RBP23.49■■□□□ 1.35
SBDS-202ENST00000414306 TRIM37O94972 964 aa23.48■■□□□ 1.35
SBDS-202ENST00000414306 GAS2L2Q8NHY3 880 aa23.48■■□□□ 1.35
SBDS-202ENST00000414306 ITGB4P16144 1822 aa23.48■■□□□ 1.35
SBDS-202ENST00000414306 NHSQ6T4R5 1651 aa23.47■■□□□ 1.35
SBDS-202ENST00000414306 MPRIPQ6WCQ1 1025 aa23.47■■□□□ 1.35
SBDS-202ENST00000414306 PTF1AQ7RTS3 328 aa23.47■■□□□ 1.35
SBDS-202ENST00000414306 SYTL4Q96C24 671 aaPredicted RBP23.47■■□□□ 1.35
SBDS-202ENST00000414306 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
SBDS-202ENST00000414306 KCNQ2O43526 872 aa23.46■■□□□ 1.35
SBDS-202ENST00000414306 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
SBDS-202ENST00000414306 TNS1Q9HBL0 1735 aaKnown RBP23.46■■□□□ 1.35
SBDS-202ENST00000414306 KDM6AO15550 1401 aaPredicted RBP23.45■■□□□ 1.34
SBDS-202ENST00000414306 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
SBDS-202ENST00000414306 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
SBDS-202ENST00000414306 MAP3K5Q99683 1374 aa23.44■■□□□ 1.34
SBDS-202ENST00000414306 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
SBDS-202ENST00000414306 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
SBDS-202ENST00000414306 BTAF1O14981 1849 aa23.43■■□□□ 1.34
SBDS-202ENST00000414306 BCL9O00512 1426 aa23.43■■□□□ 1.34
SBDS-202ENST00000414306 NKX1-1Q15270 411 aaPredicted RBP23.43■■□□□ 1.34
SBDS-202ENST00000414306 GNAT3A8MTJ3 354 aa23.42■■□□□ 1.34
SBDS-202ENST00000414306 NFE2L2Q16236 605 aa23.42■■□□□ 1.34
SBDS-202ENST00000414306 LGR6Q9HBX8 967 aa23.42■■□□□ 1.34
SBDS-202ENST00000414306 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
SBDS-202ENST00000414306 DCAF5Q96JK2 942 aa23.41■■□□□ 1.34
SBDS-202ENST00000414306 APAF1O14727 1248 aa23.39■■□□□ 1.34
SBDS-202ENST00000414306 DCTN1Q14203 1278 aa23.39■■□□□ 1.34
SBDS-202ENST00000414306 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.34
SBDS-202ENST00000414306 ADAMTS7Q9UKP4 1686 aa23.39■■□□□ 1.33
SBDS-202ENST00000414306 TMPOP42166 694 aaKnown RBP23.38■■□□□ 1.33
SBDS-202ENST00000414306 MCM10Q7L590 875 aa23.38■■□□□ 1.33
SBDS-202ENST00000414306 RNMTO43148 476 aaKnown RBP23.38■■□□□ 1.33
SBDS-202ENST00000414306 RIPK4P57078 832 aa23.38■■□□□ 1.33
SBDS-202ENST00000414306 RTF1Q92541 710 aaKnown RBP23.38■■□□□ 1.33
SBDS-202ENST00000414306 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
SBDS-202ENST00000414306 SF3B2Q13435 895 aaKnown RBP23.36■■□□□ 1.33
SBDS-202ENST00000414306 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
SBDS-202ENST00000414306 THUMPD2Q9BTF0 503 aaKnown RBP23.36■■□□□ 1.33
SBDS-202ENST00000414306 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
SBDS-202ENST00000414306 APBA3O96018 575 aa23.35■■□□□ 1.33
SBDS-202ENST00000414306 CABP4P57796 275 aa23.35■■□□□ 1.33
SBDS-202ENST00000414306 PIGBQ92521 554 aa23.34■■□□□ 1.33
SBDS-202ENST00000414306 SALL2Q9Y467 1007 aaPredicted RBP23.34■■□□□ 1.33
SBDS-202ENST00000414306 SIPA1L3O60292 1781 aaPredicted RBP23.34■■□□□ 1.33
SBDS-202ENST00000414306 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
SBDS-202ENST00000414306 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.32
SBDS-202ENST00000414306 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.32
SBDS-202ENST00000414306 MRC1P22897 1456 aa23.32■■□□□ 1.32
SBDS-202ENST00000414306 TEFQ10587 303 aa23.31■■□□□ 1.32
SBDS-202ENST00000414306 SLC52A2Q9HAB3 445 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms