RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 KDRP35968 1356 aa12.66□□□□□ -0.38
RN7SKP3-201ENST00000411409 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 IL2RBP14784 551 aa12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 EYA1Q99502 592 aa12.65□□□□□ -0.38
RN7SKP3-201ENST00000411409 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
RN7SKP3-201ENST00000411409 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
RN7SKP3-201ENST00000411409 FCHSD2O94868 740 aa12.64□□□□□ -0.39
RN7SKP3-201ENST00000411409 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
RN7SKP3-201ENST00000411409 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
RN7SKP3-201ENST00000411409 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
RN7SKP3-201ENST00000411409 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP3-201ENST00000411409 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
RN7SKP3-201ENST00000411409 GLI3P10071 1580 aa12.62□□□□□ -0.39
RN7SKP3-201ENST00000411409 ABCB7O75027 752 aa12.62□□□□□ -0.39
RN7SKP3-201ENST00000411409 TATP17735 454 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP3-201ENST00000411409 CNGB1Q14028 1251 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP3-201ENST00000411409 EXOC5O00471 708 aa12.61□□□□□ -0.39
RN7SKP3-201ENST00000411409 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
RN7SKP3-201ENST00000411409 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
RN7SKP3-201ENST00000411409 A0A0G2JS52 829 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 NEFMP07197 916 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 MYT1Q01538 1121 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 DDB1Q16531 1140 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 SPG7Q9UQ90 795 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 BCL9O00512 1426 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
RN7SKP3-201ENST00000411409 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 SULT6B1Q6IMI4 303 aa12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 PROM2Q8N271 834 aa12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
RN7SKP3-201ENST00000411409 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
RN7SKP3-201ENST00000411409 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
RN7SKP3-201ENST00000411409 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
RN7SKP3-201ENST00000411409 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
RN7SKP3-201ENST00000411409 TNS2Q63HR2 1409 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 WNK3Q9BYP7 1800 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
RN7SKP3-201ENST00000411409 DSG3P32926 999 aa12.56□□□□□ -0.4
RN7SKP3-201ENST00000411409 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
RN7SKP3-201ENST00000411409 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
RN7SKP3-201ENST00000411409 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
RN7SKP3-201ENST00000411409 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 FAM196AQ6ZSG2 479 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 EP400Q96L91 3159 aa12.55□□□□□ -0.4
RN7SKP3-201ENST00000411409 MEGF6O75095 1541 aa12.54□□□□□ -0.4
RN7SKP3-201ENST00000411409 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
RN7SKP3-201ENST00000411409 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
RN7SKP3-201ENST00000411409 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 BAG6P46379 1132 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 AKAP4Q5JQC9 854 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
RN7SKP3-201ENST00000411409 LRRC37A3O60309 1634 aa12.52□□□□□ -0.4
RN7SKP3-201ENST00000411409 HMOX1P09601 288 aa12.52□□□□□ -0.41
RN7SKP3-201ENST00000411409 PRKAR2BP31323 418 aa12.52□□□□□ -0.41
RN7SKP3-201ENST00000411409 C1orf141Q5JVX7 400 aa12.52□□□□□ -0.41
RN7SKP3-201ENST00000411409 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.41
RN7SKP3-201ENST00000411409 ADAMTS8Q9UP79 889 aa12.52□□□□□ -0.41
RN7SKP3-201ENST00000411409 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
RN7SKP3-201ENST00000411409 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
RN7SKP3-201ENST00000411409 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
RN7SKP3-201ENST00000411409 PHKG2P15735 406 aa12.5□□□□□ -0.41
RN7SKP3-201ENST00000411409 BRWD3Q6RI45 1802 aa12.5□□□□□ -0.41
RN7SKP3-201ENST00000411409 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
RN7SKP3-201ENST00000411409 CYP27B1O15528 508 aa12.49□□□□□ -0.41
RN7SKP3-201ENST00000411409 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP3-201ENST00000411409 MARCH10Q8NA82 808 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP3-201ENST00000411409 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
RN7SKP3-201ENST00000411409 MTHFSDQ2M296 383 aaKnown RBP12.48□□□□□ -0.41
RN7SKP3-201ENST00000411409 MIER1Q8N108 512 aa12.48□□□□□ -0.41
RN7SKP3-201ENST00000411409 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
RN7SKP3-201ENST00000411409 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
RN7SKP3-201ENST00000411409 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
RN7SKP3-201ENST00000411409 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
RN7SKP3-201ENST00000411409 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
RN7SKP3-201ENST00000411409 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP3-201ENST00000411409 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
RN7SKP3-201ENST00000411409 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
RN7SKP3-201ENST00000411409 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms