RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 TATP17735 454 aaPredicted RBP20.22■□□□□ 0.83
SNRNP27-202ENST00000409116 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
SNRNP27-202ENST00000409116 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
SNRNP27-202ENST00000409116 WDR43Q15061 677 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNRNP27-202ENST00000409116 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
SNRNP27-202ENST00000409116 EP400Q96L91 3159 aa20.19■□□□□ 0.82
SNRNP27-202ENST00000409116 DDB1Q16531 1140 aa20.19■□□□□ 0.82
SNRNP27-202ENST00000409116 BRWD3Q6RI45 1802 aa20.18■□□□□ 0.82
SNRNP27-202ENST00000409116 PRKAR2BP31323 418 aa20.17■□□□□ 0.82
SNRNP27-202ENST00000409116 EXOC5O00471 708 aa20.16■□□□□ 0.82
SNRNP27-202ENST00000409116 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
SNRNP27-202ENST00000409116 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
SNRNP27-202ENST00000409116 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
SNRNP27-202ENST00000409116 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 FCHSD2O94868 740 aa20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 SHANK3Q9BYB0 1731 aa20.15■□□□□ 0.82
SNRNP27-202ENST00000409116 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
SNRNP27-202ENST00000409116 DDX54Q8TDD1 881 aaKnown RBP20.14■□□□□ 0.81
SNRNP27-202ENST00000409116 ILDR2Q71H61 639 aa20.13■□□□□ 0.81
SNRNP27-202ENST00000409116 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
SNRNP27-202ENST00000409116 PHACTR3Q96KR7 559 aa20.13■□□□□ 0.81
SNRNP27-202ENST00000409116 SPG7Q9UQ90 795 aa20.13■□□□□ 0.81
SNRNP27-202ENST00000409116 PLEKHO1Q53GL0 409 aaPredicted RBP20.12■□□□□ 0.81
SNRNP27-202ENST00000409116 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
SNRNP27-202ENST00000409116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.811e-6■■■□□ 14.8
SNRNP27-202ENST00000409116 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 CYP27B1O15528 508 aa20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 ZNF530Q6P9A1 599 aaPredicted RBP20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
SNRNP27-202ENST00000409116 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
SNRNP27-202ENST00000409116 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
SNRNP27-202ENST00000409116 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
SNRNP27-202ENST00000409116 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
SNRNP27-202ENST00000409116 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
SNRNP27-202ENST00000409116 PHKG2P15735 406 aa20.07■□□□□ 0.8
SNRNP27-202ENST00000409116 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
SNRNP27-202ENST00000409116 NEFMP07197 916 aa20.06■□□□□ 0.8
SNRNP27-202ENST00000409116 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
SNRNP27-202ENST00000409116 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
SNRNP27-202ENST00000409116 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
SNRNP27-202ENST00000409116 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
SNRNP27-202ENST00000409116 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 MAP3K5Q99683 1374 aa20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.8
SNRNP27-202ENST00000409116 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.79
SNRNP27-202ENST00000409116 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.79
SNRNP27-202ENST00000409116 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.79
SNRNP27-202ENST00000409116 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.79
SNRNP27-202ENST00000409116 DOT1LQ8TEK3 1739 aa20.01■□□□□ 0.79
SNRNP27-202ENST00000409116 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
SNRNP27-202ENST00000409116 BCL9O00512 1426 aa20■□□□□ 0.79
SNRNP27-202ENST00000409116 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
SNRNP27-202ENST00000409116 APAF1O14727 1248 aa20■□□□□ 0.79
SNRNP27-202ENST00000409116 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
SNRNP27-202ENST00000409116 HSP90AB1P08238 724 aaKnown RBP19.99■□□□□ 0.79
SNRNP27-202ENST00000409116 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
SNRNP27-202ENST00000409116 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
SNRNP27-202ENST00000409116 KCNQ2O43526 872 aa19.98■□□□□ 0.79
SNRNP27-202ENST00000409116 TRIM37O94972 964 aa19.98■□□□□ 0.79
SNRNP27-202ENST00000409116 DCAF5Q96JK2 942 aa19.98■□□□□ 0.79
SNRNP27-202ENST00000409116 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
SNRNP27-202ENST00000409116 PRIM1P49642 420 aaKnown RBP19.97■□□□□ 0.79
SNRNP27-202ENST00000409116 RIPK4P57078 832 aa19.97■□□□□ 0.79
SNRNP27-202ENST00000409116 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
SNRNP27-202ENST00000409116 SBF2Q86WG5 1849 aa19.97■□□□□ 0.79
SNRNP27-202ENST00000409116 DLG5Q8TDM6 1919 aa19.96■□□□□ 0.79
SNRNP27-202ENST00000409116 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
SNRNP27-202ENST00000409116 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
SNRNP27-202ENST00000409116 MCM10Q7L590 875 aa19.96■□□□□ 0.79
SNRNP27-202ENST00000409116 NHSQ6T4R5 1651 aa19.95■□□□□ 0.78
SNRNP27-202ENST00000409116 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
SNRNP27-202ENST00000409116 IL17REQ8NFR9 667 aa19.95■□□□□ 0.78
SNRNP27-202ENST00000409116 ADAMTS7Q9UKP4 1686 aa19.95■□□□□ 0.78
SNRNP27-202ENST00000409116 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
SNRNP27-202ENST00000409116 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
SNRNP27-202ENST00000409116 KAT6BQ8WYB5 2073 aa19.93■□□□□ 0.78
SNRNP27-202ENST00000409116 VIRMAQ69YN4 1812 aaKnown RBP19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 ERVV-2B6SEH9 535 aa19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 CABP4P57796 275 aa19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 BCL11BQ9C0K0 894 aaPredicted RBP19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 CEMIPQ8WUJ3 1361 aa19.92■□□□□ 0.78
SNRNP27-202ENST00000409116 TNS1Q9HBL0 1735 aaKnown RBP19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 MRC1P22897 1456 aa19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 ITGB4P16144 1822 aa19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 HTATSF1O43719 755 aaKnown RBP19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 PIGBQ92521 554 aa19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
SNRNP27-202ENST00000409116 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
SNRNP27-202ENST00000409116 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
SNRNP27-202ENST00000409116 SLC52A2Q9HAB3 445 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms