RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 NEBLO76041 1014 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 IGHMBP2P38935 993 aaKnown RBP12.59□□□□□ -0.39
LTBP1-204ENST00000407925 ARHGAP29Q52LW3 1261 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
LTBP1-204ENST00000407925 CEBPZQ03701 1054 aaKnown RBP12.59□□□□□ -0.39
LTBP1-204ENST00000407925 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 AACSQ86V21 672 aa12.59□□□□□ -0.39
LTBP1-204ENST00000407925 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
LTBP1-204ENST00000407925 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.39
LTBP1-204ENST00000407925 RAB34Q9BZG1 259 aa12.58□□□□□ -0.39
LTBP1-204ENST00000407925 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.39
LTBP1-204ENST00000407925 ZNF76P36508 570 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 DAPK1P53355 1430 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 RTEL1-TNFRSF6BF6WH68 1400 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 KIAA1107Q9UPP5 1409 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 FAM177BA6PVY3 158 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
LTBP1-204ENST00000407925 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 SPC24Q8NBT2 197 aa12.58□□□□□ -0.4
LTBP1-204ENST00000407925 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
LTBP1-204ENST00000407925 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
LTBP1-204ENST00000407925 KIAA1328Q86T90 577 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
LTBP1-204ENST00000407925 UBXN4Q92575 508 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
LTBP1-204ENST00000407925 STARD3NLO95772 234 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
LTBP1-204ENST00000407925 SPA17Q15506 151 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 JAKMIP1Q96N16 626 aaKnown RBP12.56□□□□□ -0.4
LTBP1-204ENST00000407925 TSG101Q99816 390 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 CTAGE5O15320 804 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 FKBP15Q5T1M5 1219 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 TAX1BP1Q86VP1 789 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 PPP4R3AQ6IN85 833 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 AIDAQ96BJ3 306 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
LTBP1-204ENST00000407925 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
LTBP1-204ENST00000407925 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 STK3Q13188 491 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 PHF23Q9BUL5 403 aaPredicted RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 SEC63Q9UGP8 760 aaKnown RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 ZNF644Q9H582 1327 aaPredicted RBP12.55□□□□□ -0.4
LTBP1-204ENST00000407925 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 NEMFO60524 1076 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 KDM4AO75164 1064 aa12.55□□□□□ -0.4
LTBP1-204ENST00000407925 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
LTBP1-204ENST00000407925 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
LTBP1-204ENST00000407925 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
LTBP1-204ENST00000407925 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
LTBP1-204ENST00000407925 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 IFIT1P09914 478 aaKnown RBP12.54□□□□□ -0.4
LTBP1-204ENST00000407925 MCM4P33991 863 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 SLF2Q8IX21 1173 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 SIL1Q9H173 461 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
LTBP1-204ENST00000407925 STAMBPO95630 424 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
LTBP1-204ENST00000407925 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
LTBP1-204ENST00000407925 FAM107BQ9H098 131 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 GOLGA6L10A0A0M3HER8 536 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 CFAP100Q494V2 611 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
LTBP1-204ENST00000407925 EFCAB5A4FU69 1503 aa12.53□□□□□ -0.4
LTBP1-204ENST00000407925 POTEB2H3BUK9 544 aa12.52□□□□□ -0.4
LTBP1-204ENST00000407925 CENPHQ9H3R5 247 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms