RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
HMGB3P18-201ENST00000406327 OGFOD1Q8N543 542 aa8.02□□□□□ -1.13
HMGB3P18-201ENST00000406327 SEPT12Q8IYM1 358 aa8.01□□□□□ -1.13
HMGB3P18-201ENST00000406327 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
HMGB3P18-201ENST00000406327 STK17AQ9UEE5 414 aa8.01□□□□□ -1.13
HMGB3P18-201ENST00000406327 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
HMGB3P18-201ENST00000406327 WFS1O76024 890 aa8□□□□□ -1.13
HMGB3P18-201ENST00000406327 SSFA2P28290 1259 aa8□□□□□ -1.13
HMGB3P18-201ENST00000406327 ERFEQ4G0M1 354 aa8□□□□□ -1.13
HMGB3P18-201ENST00000406327 PTCRAQ6ISU1 281 aaPredicted RBP8□□□□□ -1.13
HMGB3P18-201ENST00000406327 SIX5Q8N196 739 aa8□□□□□ -1.13
HMGB3P18-201ENST00000406327 AMOTL2Q9Y2J4 779 aa8□□□□□ -1.13
HMGB3P18-201ENST00000406327 DPYDQ12882 1025 aa7.99□□□□□ -1.13
HMGB3P18-201ENST00000406327 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
HMGB3P18-201ENST00000406327 TXNDC2Q86VQ3 553 aa7.99□□□□□ -1.13
HMGB3P18-201ENST00000406327 BAP1Q92560 729 aa7.99□□□□□ -1.13
HMGB3P18-201ENST00000406327 S1PR4O95977 384 aa7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 SEC13P55735 322 aa7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 GTF2IP78347 998 aa7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 USP4Q13107 963 aa7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 ZNF594Q96JF6 807 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 FCF1Q9Y324 198 aaKnown RBP7.98□□□□□ -1.13
HMGB3P18-201ENST00000406327 ZBTB24O43167 697 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 ERCC3P19447 782 aa7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 C1orf216Q8TAB5 229 aa7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
HMGB3P18-201ENST00000406327 MYCP01106 439 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 CLDN10P78369 228 aa7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 INSM1Q01101 510 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 PSME1Q06323 249 aa7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 FAM69CQ0P6D2 419 aa7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 CRIPAKQ8N1N5 446 aa7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 CCDC85AQ96PX6 553 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P18-201ENST00000406327 ESPNB1AK53 854 aa7.95□□□□□ -1.14
HMGB3P18-201ENST00000406327 PHLDB3Q6NSJ2 640 aa7.95□□□□□ -1.14
HMGB3P18-201ENST00000406327 FOXJ1Q92949 421 aa7.95□□□□□ -1.14
HMGB3P18-201ENST00000406327 ESF1Q9H501 851 aaKnown RBP7.95□□□□□ -1.14
HMGB3P18-201ENST00000406327 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
HMGB3P18-201ENST00000406327 WIPF1O43516 503 aa7.94□□□□□ -1.14
HMGB3P18-201ENST00000406327 RBM25P49756 843 aaKnown RBP7.94□□□□□ -1.14
HMGB3P18-201ENST00000406327 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P18-201ENST00000406327 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
HMGB3P18-201ENST00000406327 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P18-201ENST00000406327 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
HMGB3P18-201ENST00000406327 C11orf95C9JLR9 678 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 E9PSI1 815 aa7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 M0R2N6 131 aa7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 VARSP26640 1264 aaKnown RBP7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 WNT7BP56706 349 aa7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 MAP4K5Q9Y4K4 846 aa7.92□□□□□ -1.14
HMGB3P18-201ENST00000406327 SOWAHDA6NJG2 315 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 AVPP01185 164 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 SH3BP2P78314 561 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 FOXC1Q12948 553 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 TSGA10IPQ3SY00 556 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 PLA2G2CQ5R387 149 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 KCTD15Q96SI1 283 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 PKD2L1Q9P0L9 805 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 GMPR2Q9P2T1 348 aaKnown RBP7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 EGFL7Q9UHF1 273 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
HMGB3P18-201ENST00000406327 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P18-201ENST00000406327 CXXC1Q9P0U4 656 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P18-201ENST00000406327 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
HMGB3P18-201ENST00000406327 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
HMGB3P18-201ENST00000406327 AXIN1O15169 862 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 PRMT3O60678 531 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 DKK1O94907 266 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 TRIM32Q13049 653 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 VASH1Q7L8A9 365 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 HINFPQ9BQA5 517 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
HMGB3P18-201ENST00000406327 PTCD1O75127 700 aaKnown RBP7.88□□□□□ -1.15
HMGB3P18-201ENST00000406327 SFI1A8K8P3 1242 aa7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 SERPINB4P48594 390 aa7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 RPIAP49247 311 aa7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 OCLNQ16625 522 aa7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P18-201ENST00000406327 BACH1O14867 736 aa7.86□□□□□ -1.15
HMGB3P18-201ENST00000406327 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P18-201ENST00000406327 RAB15P59190 212 aa7.86□□□□□ -1.15
HMGB3P18-201ENST00000406327 EHBP1Q8NDI1 1231 aa7.86□□□□□ -1.15
HMGB3P18-201ENST00000406327 TOR4AQ9NXH8 423 aa7.86□□□□□ -1.15
HMGB3P18-201ENST00000406327 MARSP56192 900 aaKnown RBP7.85□□□□□ -1.15
HMGB3P18-201ENST00000406327 INTS6LQ5JSJ4 861 aaKnown RBP7.85□□□□□ -1.15
HMGB3P18-201ENST00000406327 CC2D2BQ6DHV5 1058 aa7.85□□□□□ -1.15
HMGB3P18-201ENST00000406327 CYP4X1Q8N118 509 aa7.85□□□□□ -1.15
HMGB3P18-201ENST00000406327 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 ABL1P00519 1130 aa7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 ERVK-9P63128 1117 aa7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms