RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
RELA-202ENST00000406246 SPATA31A3Q5VYP0 1347 aa24.43■■□□□ 1.5
RELA-202ENST00000406246 VAMP4O75379 141 aa24.42■■□□□ 1.5
RELA-202ENST00000406246 TNS3Q68CZ2 1445 aa24.42■■□□□ 1.5
RELA-202ENST00000406246 TWISTNBQ3B726 338 aaPredicted RBP24.41■■□□□ 1.5
RELA-202ENST00000406246 PDE3AQ14432 1141 aa24.4■■□□□ 1.5
RELA-202ENST00000406246 TRIM27P14373 513 aa24.4■■□□□ 1.5
RELA-202ENST00000406246 GAS2L2Q8NHY3 880 aa24.4■■□□□ 1.5
RELA-202ENST00000406246 ZKSCAN2Q63HK3 967 aa24.39■■□□□ 1.49
RELA-202ENST00000406246 CRB1P82279 1406 aa24.38■■□□□ 1.49
RELA-202ENST00000406246 GNAT3A8MTJ3 354 aa24.38■■□□□ 1.49
RELA-202ENST00000406246 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
RELA-202ENST00000406246 CHL1O00533 1208 aa24.37■■□□□ 1.49
RELA-202ENST00000406246 CT47B1P0C2W7 299 aaPredicted RBP24.37■■□□□ 1.49
RELA-202ENST00000406246 FTSJ3Q8IY81 847 aaKnown RBP24.37■■□□□ 1.49
RELA-202ENST00000406246 PHRF1Q9P1Y6 1649 aaKnown RBP24.37■■□□□ 1.49
RELA-202ENST00000406246 KIAA0232Q92628 1395 aa24.36■■□□□ 1.49
RELA-202ENST00000406246 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
RELA-202ENST00000406246 LGR6Q9HBX8 967 aa24.35■■□□□ 1.49
RELA-202ENST00000406246 TSPYL4Q9UJ04 414 aa24.35■■□□□ 1.49
RELA-202ENST00000406246 ERBB3P21860 1342 aa24.35■■□□□ 1.49
RELA-202ENST00000406246 DZIP1LQ8IYY4 767 aaKnown RBP24.34■■□□□ 1.49
RELA-202ENST00000406246 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
RELA-202ENST00000406246 ATF7IPQ6VMQ6 1270 aa24.34■■□□□ 1.49
RELA-202ENST00000406246 MAP3K5Q99683 1374 aa24.33■■□□□ 1.48
RELA-202ENST00000406246 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
RELA-202ENST00000406246 MPRIPQ6WCQ1 1025 aa24.32■■□□□ 1.48
RELA-202ENST00000406246 IGHDP01880 384 aa24.32■■□□□ 1.48
RELA-202ENST00000406246 ZNF530Q6P9A1 599 aaPredicted RBP24.32■■□□□ 1.48
RELA-202ENST00000406246 ITPRIPQ8IWB1 547 aa24.32■■□□□ 1.48
RELA-202ENST00000406246 MRPL50Q8N5N7 158 aaKnown RBP24.32■■□□□ 1.48
RELA-202ENST00000406246 NECTIN2Q92692 538 aa24.31■■□□□ 1.48
RELA-202ENST00000406246 SOS2Q07890 1332 aaPredicted RBP24.31■■□□□ 1.48
RELA-202ENST00000406246 TMEM57Q8N5G2 664 aa24.31■■□□□ 1.48
RELA-202ENST00000406246 ALDH1L2Q3SY69 923 aa24.3■■□□□ 1.48
RELA-202ENST00000406246 MVPQ14764 893 aaKnown RBP24.29■■□□□ 1.48
RELA-202ENST00000406246 PCDHB15Q9Y5E8 787 aa24.29■■□□□ 1.48
RELA-202ENST00000406246 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
RELA-202ENST00000406246 CRYBG1Q9Y4K1 1723 aa24.28■■□□□ 1.48
RELA-202ENST00000406246 COL18A1P39060 1754 aa24.27■■□□□ 1.48
RELA-202ENST00000406246 PRDM11Q9NQV5 511 aa24.27■■□□□ 1.48
RELA-202ENST00000406246 KIF16BQ96L93 1317 aa24.26■■□□□ 1.47
RELA-202ENST00000406246 RBM19Q9Y4C8 960 aaKnown RBP24.25■■□□□ 1.47
RELA-202ENST00000406246 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
RELA-202ENST00000406246 KCNQ3O43525 872 aa24.24■■□□□ 1.47
RELA-202ENST00000406246 IPO8O15397 1037 aaKnown RBP24.22■■□□□ 1.47
RELA-202ENST00000406246 HTATSF1O43719 755 aaKnown RBP24.22■■□□□ 1.47
RELA-202ENST00000406246 TAF7Q15545 349 aaPredicted RBP24.22■■□□□ 1.47
RELA-202ENST00000406246 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
RELA-202ENST00000406246 CENPQQ7L2Z9 268 aaPredicted RBP24.21■■□□□ 1.47
RELA-202ENST00000406246 RAPGEF4Q8WZA2 1011 aa24.21■■□□□ 1.47
RELA-202ENST00000406246 STRN4Q9NRL3 753 aa24.21■■□□□ 1.47
RELA-202ENST00000406246 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.47
RELA-202ENST00000406246 AKAP4Q5JQC9 854 aa24.2■■□□□ 1.46
RELA-202ENST00000406246 ZNF428Q96B54 188 aa24.2■■□□□ 1.46
RELA-202ENST00000406246 VIRMAQ69YN4 1812 aaKnown RBP24.2■■□□□ 1.46
RELA-202ENST00000406246 MEGF6O75095 1541 aa24.19■■□□□ 1.46
RELA-202ENST00000406246 SLC4A2P04920 1241 aa24.19■■□□□ 1.46
RELA-202ENST00000406246 G2E3Q7L622 706 aa24.19■■□□□ 1.46
RELA-202ENST00000406246 RGS3P49796 1198 aa24.19■■□□□ 1.46
RELA-202ENST00000406246 C1orf115Q9H7X2 142 aa24.19■■□□□ 1.46
RELA-202ENST00000406246 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
RELA-202ENST00000406246 CAMTA1Q9Y6Y1 1673 aa24.18■■□□□ 1.46
RELA-202ENST00000406246 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
RELA-202ENST00000406246 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
RELA-202ENST00000406246 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
RELA-202ENST00000406246 TEFQ10587 303 aa24.17■■□□□ 1.46
RELA-202ENST00000406246 AMOTQ4VCS5 1084 aa24.17■■□□□ 1.46
RELA-202ENST00000406246 CEMIPQ8WUJ3 1361 aa24.17■■□□□ 1.46
RELA-202ENST00000406246 RNMTO43148 476 aaKnown RBP24.16■■□□□ 1.46
RELA-202ENST00000406246 TOM1L2Q6ZVM7 507 aa24.16■■□□□ 1.46
RELA-202ENST00000406246 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
RELA-202ENST00000406246 CPDO75976 1380 aa24.16■■□□□ 1.46
RELA-202ENST00000406246 BRPF1P55201 1214 aaPredicted RBP24.16■■□□□ 1.46
RELA-202ENST00000406246 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
RELA-202ENST00000406246 DDX19BQ9UMR2 479 aa24.16■■□□□ 1.46
RELA-202ENST00000406246 MS4A1P11836 297 aa24.15■■□□□ 1.46
RELA-202ENST00000406246 TATP17735 454 aaPredicted RBP24.15■■□□□ 1.46
RELA-202ENST00000406246 LTBP4Q8N2S1 1624 aa24.15■■□□□ 1.46
RELA-202ENST00000406246 LMO7Q8WWI1 1683 aa24.14■■□□□ 1.46
RELA-202ENST00000406246 ABCA3Q99758 1704 aa24.14■■□□□ 1.46
RELA-202ENST00000406246 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
RELA-202ENST00000406246 F6X3S4 739 aa24.13■■□□□ 1.45
RELA-202ENST00000406246 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
RELA-202ENST00000406246 LARP1Q6PKG0 1096 aaKnown RBP24.12■■□□□ 1.45
RELA-202ENST00000406246 ZBTB40Q9NUA8 1239 aa24.12■■□□□ 1.45
RELA-202ENST00000406246 PRAMEF22A3QJZ6 481 aa24.11■■□□□ 1.45
RELA-202ENST00000406246 ABCC4O15439 1325 aa24.1■■□□□ 1.45
RELA-202ENST00000406246 CYP27B1O15528 508 aa24.1■■□□□ 1.45
RELA-202ENST00000406246 SLC39A6Q13433 755 aa24.1■■□□□ 1.45
RELA-202ENST00000406246 ARHGAP45Q92619 1136 aa24.1■■□□□ 1.45
RELA-202ENST00000406246 ANXA1P04083 346 aa24.1■■□□□ 1.45
RELA-202ENST00000406246 EVA1CP58658 441 aa24.09■■□□□ 1.45
RELA-202ENST00000406246 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
RELA-202ENST00000406246 SLC4A10Q6U841 1118 aa24.09■■□□□ 1.45
RELA-202ENST00000406246 WDR17Q8IZU2 1322 aa24.09■■□□□ 1.45
RELA-202ENST00000406246 ZBTB7BO15156 539 aaPredicted RBP24.09■■□□□ 1.45
RELA-202ENST00000406246 RGS12O14924 1447 aa24.08■■□□□ 1.45
RELA-202ENST00000406246 PHKG2P15735 406 aa24.08■■□□□ 1.45
RELA-202ENST00000406246 COL5A2P05997 1499 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms