RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 SYCP1Q15431 976 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 ZNF830Q96NB3 372 aaPredicted RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 DNAJC2Q99543 621 aaKnown RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 DIAPH3Q9NSV4 1193 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 KIF1BO60333 1816 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 UVSSAQ2YD98 709 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 POLR3AO14802 1390 aaPredicted RBP11.95□□□□□ -0.5
TNFSF11-204ENST00000405262 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
TNFSF11-204ENST00000405262 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
TNFSF11-204ENST00000405262 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 ZNF771Q7L3S4 317 aaPredicted RBP11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 XRN1Q8IZH2 1706 aaKnown RBP11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 FAM184AQ8NB25 1140 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 SLAIN2Q9P270 581 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 METP08581 1390 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 NUCB1Q02818 461 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 RABEP1Q15276 862 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
TNFSF11-204ENST00000405262 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 CREBRFQ8IUR6 639 aa11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 TSPYL1Q9H0U9 437 aa11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 CD2BP2O95400 341 aaKnown RBP11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 CHAF1AQ13111 956 aaPredicted RBP11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 MYOM1P52179 1685 aa11.92□□□□□ -0.5
TNFSF11-204ENST00000405262 SYAP1Q96A49 352 aaPredicted RBP11.91□□□□□ -0.5
TNFSF11-204ENST00000405262 TSPY26PQ9H489 355 aa11.91□□□□□ -0.5
TNFSF11-204ENST00000405262 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
TNFSF11-204ENST00000405262 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
TNFSF11-204ENST00000405262 PHF14O94880 888 aa11.9□□□□□ -0.5
TNFSF11-204ENST00000405262 TPM3P06753 285 aa11.9□□□□□ -0.5
TNFSF11-204ENST00000405262 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 TIGD1Q96MW7 591 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 SYCE3A1L190 88 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
TNFSF11-204ENST00000405262 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
TNFSF11-204ENST00000405262 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
TNFSF11-204ENST00000405262 PPLO60437 1756 aa11.88□□□□□ -0.51
TNFSF11-204ENST00000405262 COL16A1Q07092 1604 aaPredicted RBP11.88□□□□□ -0.51
TNFSF11-204ENST00000405262 VGLL3A8MV65 326 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 ATF3P18847 181 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 CHD1LQ86WJ1 897 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 TSC1Q92574 1164 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 CALCOCO1Q9P1Z2 691 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
TNFSF11-204ENST00000405262 TULP2O00295 520 aa11.86□□□□□ -0.51
TNFSF11-204ENST00000405262 KCNJ4P48050 445 aa11.86□□□□□ -0.51
TNFSF11-204ENST00000405262 TBC1D9Q6ZT07 1266 aa11.86□□□□□ -0.51
TNFSF11-204ENST00000405262 DDX41Q9UJV9 622 aaKnown RBP11.86□□□□□ -0.51
TNFSF11-204ENST00000405262 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
TNFSF11-204ENST00000405262 NALCNQ8IZF0 1738 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 DCCP43146 1447 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 TEX2Q8IWB9 1127 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 ZBTB40Q9NUA8 1239 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 AHDC1Q5TGY3 1603 aaPredicted RBP11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 RPGRIP1LQ68CZ1 1315 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 AK9Q5TCS8 1911 aa11.85□□□□□ -0.51
TNFSF11-204ENST00000405262 CDC45O75419 566 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 CTNNA3Q9UI47 895 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 MST1RQ04912 1400 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 JCADQ9P266 1359 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
TNFSF11-204ENST00000405262 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 TERF2Q15554 542 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 RGL3Q3MIN7 710 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 RNF214Q8ND24 703 aa11.83□□□□□ -0.52
TNFSF11-204ENST00000405262 ADGRF5Q8IZF2 1346 aa11.82□□□□□ -0.52
TNFSF11-204ENST00000405262 IFT172Q9UG01 1749 aa11.82□□□□□ -0.52
TNFSF11-204ENST00000405262 PTCH1Q13635 1447 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms