RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
NCOA1-204ENST00000405141 FILIP1LQ4L180 1135 aa11.25□□□□□ -0.61
NCOA1-204ENST00000405141 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
NCOA1-204ENST00000405141 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
NCOA1-204ENST00000405141 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
NCOA1-204ENST00000405141 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
NCOA1-204ENST00000405141 TMX1Q9H3N1 280 aa11.25□□□□□ -0.61
NCOA1-204ENST00000405141 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
NCOA1-204ENST00000405141 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 F6X3S4 739 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 TBC1D32Q96NH3 1257 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 C8orf34Q49A92 452 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
NCOA1-204ENST00000405141 MAGEC2Q9UBF1 373 aaPredicted RBP11.24□□□□□ -0.61
NCOA1-204ENST00000405141 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
NCOA1-204ENST00000405141 CCDC183Q5T5S1 534 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
NCOA1-204ENST00000405141 SART3Q15020 963 aaKnown RBP11.23□□□□□ -0.61
NCOA1-204ENST00000405141 PPFIBP1Q86W92 1011 aa11.23□□□□□ -0.61
NCOA1-204ENST00000405141 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
NCOA1-204ENST00000405141 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
NCOA1-204ENST00000405141 CKAP2LQ8IYA6 745 aa11.23□□□□□ -0.61
NCOA1-204ENST00000405141 CNNM1Q9NRU3 951 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
NCOA1-204ENST00000405141 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
NCOA1-204ENST00000405141 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 CCDC69A6NI79 296 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 CEP57L1Q8IYX8 460 aa11.22□□□□□ -0.61
NCOA1-204ENST00000405141 RPRD2Q5VT52 1461 aaKnown RBP11.21□□□□□ -0.61
NCOA1-204ENST00000405141 OFD1O75665 1012 aa11.21□□□□□ -0.61
NCOA1-204ENST00000405141 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.61
NCOA1-204ENST00000405141 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
NCOA1-204ENST00000405141 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
NCOA1-204ENST00000405141 HSP90AB2PQ58FF8 381 aa11.21□□□□□ -0.61
NCOA1-204ENST00000405141 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
NCOA1-204ENST00000405141 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.61
NCOA1-204ENST00000405141 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
NCOA1-204ENST00000405141 TNNQ9UQP3 1299 aa11.21□□□□□ -0.62
NCOA1-204ENST00000405141 CBFA2T2O43439 604 aa11.21□□□□□ -0.62
NCOA1-204ENST00000405141 CDR1P51861 262 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 CFAP65Q6ZU64 1925 aaKnown RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 ADCY5O95622 1261 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 TRMT1Q9NXH9 659 aaKnown RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 TSPYL1Q9H0U9 437 aa11.2□□□□□ -0.62
NCOA1-204ENST00000405141 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
NCOA1-204ENST00000405141 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 ADGRF5Q8IZF2 1346 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 CDK5RAP3Q96JB5 506 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 SPG7Q9UQ90 795 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 IQGAP2Q13576 1575 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 NME9Q86XW9 330 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 CTDP1Q9Y5B0 961 aaPredicted RBP11.19□□□□□ -0.62
NCOA1-204ENST00000405141 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
NCOA1-204ENST00000405141 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■■■■■ 34.1
NCOA1-204ENST00000405141 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 PTPRKQ15262 1439 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 BOLA2Q9H3K6 86 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
NCOA1-204ENST00000405141 LRRFIP2Q9Y608 721 aaKnown RBP11.19□□□□□ -0.62
NCOA1-204ENST00000405141 CUL7Q14999 1698 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 GJB2P29033 226 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 PTPN14Q15678 1187 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
NCOA1-204ENST00000405141 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 PPFIA3O75145 1194 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 CABP4P57796 275 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 CFAP100Q494V2 611 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
NCOA1-204ENST00000405141 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 TXLNAP40222 546 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 CENPHQ9H3R5 247 aa11.18□□□□□ -0.62
NCOA1-204ENST00000405141 FAM135AQ9P2D6 1515 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 TANGO6Q9C0B7 1094 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 TNNT1P13805 278 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 ATF3P18847 181 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms