RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
GABRB3-203ENST00000400188 CFAP53Q96M91 514 aa12.96□□□□□ -0.34
GABRB3-203ENST00000400188 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
GABRB3-203ENST00000400188 DDB1Q16531 1140 aa12.95□□□□□ -0.34
GABRB3-203ENST00000400188 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
GABRB3-203ENST00000400188 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
GABRB3-203ENST00000400188 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-203ENST00000400188 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
GABRB3-203ENST00000400188 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
GABRB3-203ENST00000400188 KDRP35968 1356 aa12.93□□□□□ -0.34
GABRB3-203ENST00000400188 EXOC5O00471 708 aa12.93□□□□□ -0.34
GABRB3-203ENST00000400188 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-203ENST00000400188 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
GABRB3-203ENST00000400188 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
GABRB3-203ENST00000400188 TNS2Q63HR2 1409 aa12.93□□□□□ -0.34
GABRB3-203ENST00000400188 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-203ENST00000400188 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
GABRB3-203ENST00000400188 SHANK3Q9BYB0 1731 aa12.92□□□□□ -0.34
GABRB3-203ENST00000400188 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
GABRB3-203ENST00000400188 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-203ENST00000400188 SUPT16HQ9Y5B9 1047 aaKnown RBP12.91□□□□□ -0.34
GABRB3-203ENST00000400188 CYP27B1O15528 508 aa12.9□□□□□ -0.34
GABRB3-203ENST00000400188 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
GABRB3-203ENST00000400188 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
GABRB3-203ENST00000400188 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
GABRB3-203ENST00000400188 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
GABRB3-203ENST00000400188 SOCS7O14512 581 aa12.9□□□□□ -0.35
GABRB3-203ENST00000400188 PRKAR2BP31323 418 aa12.9□□□□□ -0.35
GABRB3-203ENST00000400188 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
GABRB3-203ENST00000400188 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
GABRB3-203ENST00000400188 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
GABRB3-203ENST00000400188 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
GABRB3-203ENST00000400188 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
GABRB3-203ENST00000400188 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
GABRB3-203ENST00000400188 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
GABRB3-203ENST00000400188 KCNQ2O43526 872 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-203ENST00000400188 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 FCHSD2O94868 740 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 TRIM37O94972 964 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 PHKG2P15735 406 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
GABRB3-203ENST00000400188 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
GABRB3-203ENST00000400188 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-203ENST00000400188 PNISRQ8TF01 805 aaKnown RBP12.85□□□□□ -0.35
GABRB3-203ENST00000400188 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
GABRB3-203ENST00000400188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
GABRB3-203ENST00000400188 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
GABRB3-203ENST00000400188 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
GABRB3-203ENST00000400188 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
GABRB3-203ENST00000400188 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
GABRB3-203ENST00000400188 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
GABRB3-203ENST00000400188 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-203ENST00000400188 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
GABRB3-203ENST00000400188 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-203ENST00000400188 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 FAM9BQ8IZU0 186 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
GABRB3-203ENST00000400188 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
GABRB3-203ENST00000400188 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-203ENST00000400188 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
GABRB3-203ENST00000400188 DEFB132Q7Z7B7 95 aa12.81□□□□□ -0.36
GABRB3-203ENST00000400188 BCL9O00512 1426 aa12.81□□□□□ -0.36
GABRB3-203ENST00000400188 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
GABRB3-203ENST00000400188 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
GABRB3-203ENST00000400188 PLEKHG2Q9H7P9 1386 aa12.79□□□□□ -0.36
GABRB3-203ENST00000400188 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
GABRB3-203ENST00000400188 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
GABRB3-203ENST00000400188 ADRA2BP18089 450 aa12.79□□□□□ -0.36
GABRB3-203ENST00000400188 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
GABRB3-203ENST00000400188 MCM10Q7L590 875 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
GABRB3-203ENST00000400188 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 MAPK8IP3Q9UPT6 1336 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 APBA3O96018 575 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 PIGBQ92521 554 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
GABRB3-203ENST00000400188 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-203ENST00000400188 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
GABRB3-203ENST00000400188 APAF1O14727 1248 aa12.77□□□□□ -0.37
GABRB3-203ENST00000400188 RNMTO43148 476 aaKnown RBP12.77□□□□□ -0.37
GABRB3-203ENST00000400188 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-203ENST00000400188 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
GABRB3-203ENST00000400188 TMPOP42166 694 aaKnown RBP12.76□□□□□ -0.37
GABRB3-203ENST00000400188 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
GABRB3-203ENST00000400188 ITGB4P16144 1822 aa12.76□□□□□ -0.37
GABRB3-203ENST00000400188 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
GABRB3-203ENST00000400188 BTAF1O14981 1849 aa12.76□□□□□ -0.37
GABRB3-203ENST00000400188 KCNQ4P56696 695 aa12.76□□□□□ -0.37
GABRB3-203ENST00000400188 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
GABRB3-203ENST00000400188 NEFMP07197 916 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms