RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 RILPL2Q969X0 211 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 FKBP5Q13451 457 aaPredicted RBP11.74□□□□□ -0.53
PTPRM-203ENST00000400060 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
PTPRM-203ENST00000400060 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
PTPRM-203ENST00000400060 A6NNZ2 444 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 TUBB8Q3ZCM7 444 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 GOLGA5Q8TBA6 731 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 SCAND2PQ9GZW5 306 aaPredicted RBP11.73□□□□□ -0.53
PTPRM-203ENST00000400060 PPP6R1Q9UPN7 881 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 A0A1B0GUA9 196 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
PTPRM-203ENST00000400060 CEP120Q8N960 986 aa11.73□□□□□ -0.53
PTPRM-203ENST00000400060 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
PTPRM-203ENST00000400060 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 GOLGA6L10A6NI86 522 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 GNAI1P63096 354 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 GEMIN8Q9NWZ8 242 aaKnown RBP11.72□□□□□ -0.53
PTPRM-203ENST00000400060 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 CCDC50Q8IVM0 306 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 CFAP45Q9UL16 551 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
PTPRM-203ENST00000400060 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 CPSF2Q9P2I0 782 aaKnown RBP11.71□□□□□ -0.53
PTPRM-203ENST00000400060 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
PTPRM-203ENST00000400060 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 ELP1O95163 1332 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 NESP48681 1621 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
PTPRM-203ENST00000400060 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
PTPRM-203ENST00000400060 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.54
PTPRM-203ENST00000400060 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.54
PTPRM-203ENST00000400060 TTC12Q9H892 705 aaPredicted RBP11.71□□□□□ -0.54
PTPRM-203ENST00000400060 INTS4Q96HW7 963 aaKnown RBP11.7□□□□□ -0.54
PTPRM-203ENST00000400060 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 EZRP15311 586 aaKnown RBP11.7□□□□□ -0.54
PTPRM-203ENST00000400060 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
PTPRM-203ENST00000400060 NUCB1Q02818 461 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 ICE2Q659A1 982 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
PTPRM-203ENST00000400060 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
PTPRM-203ENST00000400060 CAPN2P17655 700 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 MPNDQ8N594 471 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
PTPRM-203ENST00000400060 GOLGA6L10A0A0M3HER8 536 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 TERF2Q15554 542 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 RAD50Q92878 1312 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 KIF14Q15058 1648 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 CC2D2AQ9P2K1 1620 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 IGSF3O75054 1194 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 STX1AQ16623 288 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 HIP1O00291 1037 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 ANAPC15P60006 121 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 TUBB2AQ13885 445 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 TUBB2BQ9BVA1 445 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
PTPRM-203ENST00000400060 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
PTPRM-203ENST00000400060 TRDNQ13061 729 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 CAGE1Q8TC20 777 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
PTPRM-203ENST00000400060 MLECQ14165 292 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 CHMP3Q9Y3E7 222 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 DAPK1P53355 1430 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 GOLIM4O00461 696 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 CEP112Q8N8E3 955 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 NOB1Q9ULX3 412 aaKnown RBP11.68□□□□□ -0.54
PTPRM-203ENST00000400060 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
PTPRM-203ENST00000400060 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
PTPRM-203ENST00000400060 EBAG9O00559 213 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 RRP12Q5JTH9 1297 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms