RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 UBAC1Q9BSL1 405 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 NEBLO76041 1014 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 TMCO3Q6UWJ1 677 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 ZSCAN12O43309 604 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 ESPNB1AK53 854 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 C1orf115Q9H7X2 142 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 ANKRD50Q9ULJ7 1429 aa15.7■□□□□ 0.1
LDLRAD4-203ENST00000399848 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 MPHOSPH8Q99549 860 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 GOLGA6L10A0A0M3HER8 536 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 STAMBPO95630 424 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 GIMAP7Q8NHV1 300 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 FAM107BQ9H098 131 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
LDLRAD4-203ENST00000399848 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 PDRG1Q9NUG6 133 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 VPS36Q86VN1 386 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 MATR3P43243 847 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■□□□ 13.4
LDLRAD4-203ENST00000399848 SPA17Q15506 151 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 SFPQP23246 707 aaKnown RBP eCLIP15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 KIF18AQ8NI77 898 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
LDLRAD4-203ENST00000399848 KIF5CO60282 957 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 TDO2P48775 406 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 ERICH4A6NGS2 130 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 LRRC9Q6ZRR7 1453 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 EXOSC9Q06265 439 aaKnown RBP15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 ANAPC15P60006 121 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 ZNF287Q9HBT7 754 aa15.67■□□□□ 0.1
LDLRAD4-203ENST00000399848 PTPN14Q15678 1187 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 FKBP4Q02790 459 aaKnown RBP eCLIP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 MVPQ14764 893 aaKnown RBP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 FILIP1Q7Z7B0 1213 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 MPHOSPH10O00566 681 aaKnown RBP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 RBM5P52756 815 aaKnown RBP eCLIP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 SSBP05455 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 CASQ1P31415 396 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 ZSCAN30Q86W11 494 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
LDLRAD4-203ENST00000399848 TATP17735 454 aaPredicted RBP15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 NF2P35240 595 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 SSR1P43307 286 aaKnown RBP15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 AACSQ86V21 672 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 MYZAPP0CAP1 466 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 ZNF76P36508 570 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 MICALCLQ6ZW33 695 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 SIL1Q9H173 461 aa15.65■□□□□ 0.1
LDLRAD4-203ENST00000399848 JAKMIP1Q96N16 626 aaKnown RBP15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 MCM4P33991 863 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 FKBP15Q5T1M5 1219 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 STK11IPQ8N1F8 1099 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 CCDC97Q96F63 343 aaPredicted RBP15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 FEZ1Q99689 392 aa15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
LDLRAD4-203ENST00000399848 CASTP20810 708 aaKnown RBP15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 CCDC83Q8IWF9 413 aa15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 TNIP1Q15025 636 aa15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 CABP4P57796 275 aa15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 CWC27Q6UX04 472 aaKnown RBP15.63■□□□□ 0.09
LDLRAD4-203ENST00000399848 CCDC183Q5T5S1 534 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 CDCA7LQ96GN5 454 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 TSG101Q99816 390 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 ANO10Q9NW15 660 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 IFFO1Q0D2I5 559 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 TAOK3Q9H2K8 898 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 LUZP1Q86V48 1076 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 CALCOCO1Q9P1Z2 691 aa15.62■□□□□ 0.09
LDLRAD4-203ENST00000399848 SYCE3A1L190 88 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 SRGAP3O43295 1099 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 PHAXQ9H814 394 aaKnown RBP15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 CGNQ9P2M7 1197 aaKnown RBP15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 RFX1P22670 979 aa15.61■□□□□ 0.09
LDLRAD4-203ENST00000399848 SCAND2PQ9GZW5 306 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms