RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 AXIN2Q9Y2T1 843 aa14□□□□□ -0.17
NIFKP1-201ENST00000398317 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
NIFKP1-201ENST00000398317 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
NIFKP1-201ENST00000398317 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
NIFKP1-201ENST00000398317 RREB1Q92766 1687 aa13.98□□□□□ -0.17
NIFKP1-201ENST00000398317 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
NIFKP1-201ENST00000398317 ARHGEF25Q86VW2 580 aa13.97□□□□□ -0.17
NIFKP1-201ENST00000398317 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
NIFKP1-201ENST00000398317 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
NIFKP1-201ENST00000398317 WNK3Q9BYP7 1800 aa13.96□□□□□ -0.17
NIFKP1-201ENST00000398317 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
NIFKP1-201ENST00000398317 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
NIFKP1-201ENST00000398317 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.18
NIFKP1-201ENST00000398317 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 DDB1Q16531 1140 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
NIFKP1-201ENST00000398317 OVOS2A0A0G2JMS6 1433 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 OVOS2A0A0J9YW53 1432 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 CSB-PGBD3P0DP91 1061 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 OVOS2Q6IE36 1432 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 NFAT5O94916 1531 aa13.94□□□□□ -0.18
NIFKP1-201ENST00000398317 C7P10643 843 aa13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 TMC1Q8TDI8 760 aa13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
NIFKP1-201ENST00000398317 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
NIFKP1-201ENST00000398317 CARD10Q9BWT7 1032 aa13.92□□□□□ -0.18
NIFKP1-201ENST00000398317 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 NME9Q86XW9 330 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 SLC12A5Q9H2X9 1139 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
NIFKP1-201ENST00000398317 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
NIFKP1-201ENST00000398317 TONSLQ96HA7 1378 aa13.9□□□□□ -0.18
NIFKP1-201ENST00000398317 LTN1O94822 1766 aa13.9□□□□□ -0.18
NIFKP1-201ENST00000398317 STK25O00506 426 aa13.89□□□□□ -0.19
NIFKP1-201ENST00000398317 SEC24BO95487 1268 aa13.89□□□□□ -0.19
NIFKP1-201ENST00000398317 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
NIFKP1-201ENST00000398317 CDCA7Q9BWT1 371 aaPredicted RBP13.89□□□□□ -0.19
NIFKP1-201ENST00000398317 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
NIFKP1-201ENST00000398317 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 EXOC5O00471 708 aa13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 PLSCR1O15162 318 aa13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 LHX8Q68G74 356 aa13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
NIFKP1-201ENST00000398317 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
NIFKP1-201ENST00000398317 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
NIFKP1-201ENST00000398317 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
NIFKP1-201ENST00000398317 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
NIFKP1-201ENST00000398317 IER5LQ5T953 404 aa13.86□□□□□ -0.19
NIFKP1-201ENST00000398317 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
NIFKP1-201ENST00000398317 NLRP2Q9NX02 1062 aa13.86□□□□□ -0.19
NIFKP1-201ENST00000398317 ABCC6O95255 1503 aa13.85□□□□□ -0.19
NIFKP1-201ENST00000398317 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
NIFKP1-201ENST00000398317 EDC4Q6P2E9 1401 aaKnown RBP13.85□□□□□ -0.19
NIFKP1-201ENST00000398317 ERBB3P21860 1342 aa13.85□□□□□ -0.19
NIFKP1-201ENST00000398317 BCL9O00512 1426 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 KCNQ2O43526 872 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 ANKRD24Q8TF21 1146 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
NIFKP1-201ENST00000398317 TNS2Q63HR2 1409 aa13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 ACSBG1Q96GR2 724 aa13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 TESK2Q96S53 571 aa13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 PDGFDQ9GZP0 370 aaPredicted RBP13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
NIFKP1-201ENST00000398317 PLCG2P16885 1265 aa13.82□□□□□ -0.2
NIFKP1-201ENST00000398317 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
NIFKP1-201ENST00000398317 PUS7Q96PZ0 661 aaKnown RBP13.82□□□□□ -0.2
NIFKP1-201ENST00000398317 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
NIFKP1-201ENST00000398317 IL2RBP14784 551 aa13.81□□□□□ -0.2
NIFKP1-201ENST00000398317 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
NIFKP1-201ENST00000398317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIFKP1-201ENST00000398317 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
NIFKP1-201ENST00000398317 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
NIFKP1-201ENST00000398317 FBLN1P23142 703 aa13.8□□□□□ -0.2
NIFKP1-201ENST00000398317 ZBTB7AO95365 584 aa13.79□□□□□ -0.2
NIFKP1-201ENST00000398317 IP6K1Q92551 441 aa13.79□□□□□ -0.2
NIFKP1-201ENST00000398317 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
NIFKP1-201ENST00000398317 BTAF1O14981 1849 aa13.78□□□□□ -0.2
NIFKP1-201ENST00000398317 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
NIFKP1-201ENST00000398317 SLC15A2Q16348 729 aa13.77□□□□□ -0.21
NIFKP1-201ENST00000398317 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
NIFKP1-201ENST00000398317 COG3Q96JB2 828 aa13.77□□□□□ -0.21
NIFKP1-201ENST00000398317 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms