RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MYZAPP0CAP1 466 aa14.43□□□□□ -0.1
SMU1-201ENST00000397149 CFAP58Q5T655 872 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 TSNARE1Q96NA8 513 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 FEZ1Q99689 392 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 UBAC1Q9BSL1 405 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 CCDC150Q8NCX0 1101 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 DAAM2Q86T65 1068 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 MXRA7P84157 204 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 TNIP1Q15025 636 aa14.42□□□□□ -0.1
SMU1-201ENST00000397149 KIF15Q9NS87 1388 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 HLTFQ14527 1009 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMU1-201ENST00000397149 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
SMU1-201ENST00000397149 CAMK4Q16566 473 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 PAIP2Q9BPZ3 127 aaKnown RBP14.41□□□□□ -0.1
SMU1-201ENST00000397149 MAP3K9P80192 1104 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
SMU1-201ENST00000397149 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 UBXN4Q92575 508 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 MBD3O95983 291 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
SMU1-201ENST00000397149 L3MBTL2Q969R5 705 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
SMU1-201ENST00000397149 PHLDB1Q86UU1 1377 aa14.4□□□□□ -0.1
SMU1-201ENST00000397149 FBF1Q8TES7 1133 aa14.4□□□□□ -0.1
SMU1-201ENST00000397149 DDX11Q96FC9 970 aa14.4□□□□□ -0.1
SMU1-201ENST00000397149 CLGNO14967 610 aa14.4□□□□□ -0.1
SMU1-201ENST00000397149 TTC36A6NLP5 189 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 CPLX3Q8WVH0 158 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 MMRN2Q9H8L6 949 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 WDHD1O75717 1129 aaPredicted RBP14.39□□□□□ -0.11
SMU1-201ENST00000397149 CASQ1P31415 396 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 TDRD12Q587J7 1177 aaKnown RBP14.39□□□□□ -0.11
SMU1-201ENST00000397149 NAP1L3Q99457 506 aaPredicted RBP14.39□□□□□ -0.11
SMU1-201ENST00000397149 LRP2BPQ9P2M1 347 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 FSD2A1L4K1 749 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 CRACR2BQ8N4Y2 399 aaPredicted RBP14.39□□□□□ -0.11
SMU1-201ENST00000397149 SPATA32Q96LK8 384 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 NDC80O14777 642 aa14.39□□□□□ -0.11
SMU1-201ENST00000397149 TPD52P55327 224 aaPredicted RBP14.38□□□□□ -0.11
SMU1-201ENST00000397149 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
SMU1-201ENST00000397149 GNAI1P63096 354 aa14.38□□□□□ -0.11
SMU1-201ENST00000397149 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
SMU1-201ENST00000397149 TMOD2Q9NZR1 351 aa14.38□□□□□ -0.11
SMU1-201ENST00000397149 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
SMU1-201ENST00000397149 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 ZBTB9Q96C00 473 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 GIGYF2Q6Y7W6 1299 aaKnown RBP14.37□□□□□ -0.11
SMU1-201ENST00000397149 PIP4K2BP78356 416 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 HIP1O00291 1037 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
SMU1-201ENST00000397149 KRT85P78386 507 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 IMMTQ16891 758 aaKnown RBP14.37□□□□□ -0.11
SMU1-201ENST00000397149 C6orf163Q5TEZ5 329 aa14.37□□□□□ -0.11
SMU1-201ENST00000397149 SEC63Q9UGP8 760 aaKnown RBP14.36□□□□□ -0.11
SMU1-201ENST00000397149 EEA1Q15075 1411 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 KIF20AO95235 890 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 NLRP6P59044 892 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 CCDC6Q16204 474 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 TSG101Q99816 390 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 FKBP15Q5T1M5 1219 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 KIF27Q86VH2 1401 aa14.36□□□□□ -0.11
SMU1-201ENST00000397149 IDH1O75874 414 aaKnown RBP14.36□□□□□ -0.11
SMU1-201ENST00000397149 CCDC30Q5VVM6 783 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 GGNBP2Q9H3C7 697 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 MINDY4BA8MYZ0 360 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 POLR3DP05423 398 aaPredicted RBP14.35□□□□□ -0.11
SMU1-201ENST00000397149 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
SMU1-201ENST00000397149 IKBKGQ9Y6K9 419 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 PRC1O43663 620 aa14.35□□□□□ -0.11
SMU1-201ENST00000397149 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
SMU1-201ENST00000397149 TCERG1LQ5VWI1 586 aa14.34□□□□□ -0.11
SMU1-201ENST00000397149 CABP4P57796 275 aa14.34□□□□□ -0.11
SMU1-201ENST00000397149 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
SMU1-201ENST00000397149 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
SMU1-201ENST00000397149 ANKRD30AQ9BXX3 1397 aa14.34□□□□□ -0.11
SMU1-201ENST00000397149 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.11
SMU1-201ENST00000397149 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.11
SMU1-201ENST00000397149 ABTB2Q8N961 1025 aa14.33□□□□□ -0.11
SMU1-201ENST00000397149 KIF5CO60282 957 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 CCDC63Q8NA47 563 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
SMU1-201ENST00000397149 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
SMU1-201ENST00000397149 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMU1-201ENST00000397149 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
SMU1-201ENST00000397149 SMTNL1A8MU46 457 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 MAP9Q49MG5 647 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 ESCO1Q5FWF5 840 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 DPH6Q7L8W6 267 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 TRMT1Q9NXH9 659 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms