RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
HLA-A-204ENST00000396634 RAPGEF4Q8WZA2 1011 aa23.01■■□□□ 1.27
HLA-A-204ENST00000396634 KDRP35968 1356 aa23■■□□□ 1.27
HLA-A-204ENST00000396634 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
HLA-A-204ENST00000396634 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
HLA-A-204ENST00000396634 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
HLA-A-204ENST00000396634 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
HLA-A-204ENST00000396634 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
HLA-A-204ENST00000396634 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
HLA-A-204ENST00000396634 ADAMTS8Q9UP79 889 aa22.98■■□□□ 1.27
HLA-A-204ENST00000396634 PKD1L3Q7Z443 1732 aa22.97■■□□□ 1.27
HLA-A-204ENST00000396634 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
HLA-A-204ENST00000396634 DDB1Q16531 1140 aa22.97■■□□□ 1.27
HLA-A-204ENST00000396634 CCDC146Q8IYE0 955 aa22.97■■□□□ 1.27
HLA-A-204ENST00000396634 ILDR2Q71H61 639 aa22.96■■□□□ 1.27
HLA-A-204ENST00000396634 TNS2Q63HR2 1409 aa22.96■■□□□ 1.27
HLA-A-204ENST00000396634 DDX54Q8TDD1 881 aaKnown RBP22.95■■□□□ 1.26
HLA-A-204ENST00000396634 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
HLA-A-204ENST00000396634 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
HLA-A-204ENST00000396634 KAT6BQ8WYB5 2073 aa22.94■■□□□ 1.26
HLA-A-204ENST00000396634 PNISRQ8TF01 805 aaKnown RBP22.94■■□□□ 1.26
HLA-A-204ENST00000396634 EXOC5O00471 708 aa22.93■■□□□ 1.26
HLA-A-204ENST00000396634 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
HLA-A-204ENST00000396634 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-204ENST00000396634 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-204ENST00000396634 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
HLA-A-204ENST00000396634 CYP27B1O15528 508 aa22.9■■□□□ 1.26
HLA-A-204ENST00000396634 KRT27Q7Z3Y8 459 aa22.9■■□□□ 1.26
HLA-A-204ENST00000396634 FCHSD2O94868 740 aa22.9■■□□□ 1.26
HLA-A-204ENST00000396634 MTHFSDQ2M296 383 aaKnown RBP22.9■■□□□ 1.26
HLA-A-204ENST00000396634 PLEKHF1Q96S99 279 aa22.89■■□□□ 1.25
HLA-A-204ENST00000396634 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
HLA-A-204ENST00000396634 CCER2I3L3R5 266 aa22.88■■□□□ 1.25
HLA-A-204ENST00000396634 ZNF530Q6P9A1 599 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-204ENST00000396634 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
HLA-A-204ENST00000396634 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
HLA-A-204ENST00000396634 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
HLA-A-204ENST00000396634 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
HLA-A-204ENST00000396634 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
HLA-A-204ENST00000396634 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
HLA-A-204ENST00000396634 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
HLA-A-204ENST00000396634 TOGARAM1Q9Y4F4 1720 aa22.85■■□□□ 1.25
HLA-A-204ENST00000396634 PHKG2P15735 406 aa22.83■■□□□ 1.25
HLA-A-204ENST00000396634 ACSBG1Q96GR2 724 aa22.83■■□□□ 1.25
HLA-A-204ENST00000396634 SBF2Q86WG5 1849 aa22.83■■□□□ 1.25
HLA-A-204ENST00000396634 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
HLA-A-204ENST00000396634 NEUROD2Q15784 382 aa22.83■■□□□ 1.24
HLA-A-204ENST00000396634 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
HLA-A-204ENST00000396634 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
HLA-A-204ENST00000396634 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
HLA-A-204ENST00000396634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.81■■□□□ 1.24
HLA-A-204ENST00000396634 C1orf141Q5JVX7 400 aa22.8■■□□□ 1.24
HLA-A-204ENST00000396634 IFNL2Q8IZJ0 200 aa22.8■■□□□ 1.24
HLA-A-204ENST00000396634 RUNDC1Q96C34 613 aa22.8■■□□□ 1.24
HLA-A-204ENST00000396634 KDM6AO15550 1401 aaPredicted RBP22.8■■□□□ 1.24
HLA-A-204ENST00000396634 APAF1O14727 1248 aa22.79■■□□□ 1.24
HLA-A-204ENST00000396634 KCNQ2O43526 872 aa22.79■■□□□ 1.24
HLA-A-204ENST00000396634 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
HLA-A-204ENST00000396634 ITGB4P16144 1822 aa22.78■■□□□ 1.24
HLA-A-204ENST00000396634 SCN11AQ9UI33 1791 aa22.78■■□□□ 1.24
HLA-A-204ENST00000396634 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
HLA-A-204ENST00000396634 NEFMP07197 916 aa22.77■■□□□ 1.24
HLA-A-204ENST00000396634 SYTL4Q96C24 671 aaPredicted RBP22.77■■□□□ 1.24
HLA-A-204ENST00000396634 SALL2Q9Y467 1007 aaPredicted RBP22.77■■□□□ 1.24
HLA-A-204ENST00000396634 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
HLA-A-204ENST00000396634 GAS2L2Q8NHY3 880 aa22.77■■□□□ 1.24
HLA-A-204ENST00000396634 TRIM37O94972 964 aa22.76■■□□□ 1.23
HLA-A-204ENST00000396634 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
HLA-A-204ENST00000396634 AKAP4Q5JQC9 854 aa22.76■■□□□ 1.23
HLA-A-204ENST00000396634 THUMPD2Q9BTF0 503 aaKnown RBP22.76■■□□□ 1.23
HLA-A-204ENST00000396634 TMPOP42166 694 aaKnown RBP22.75■■□□□ 1.23
HLA-A-204ENST00000396634 MCM10Q7L590 875 aa22.75■■□□□ 1.23
HLA-A-204ENST00000396634 PLEKHG2Q9H7P9 1386 aa22.75■■□□□ 1.23
HLA-A-204ENST00000396634 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
HLA-A-204ENST00000396634 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
HLA-A-204ENST00000396634 PRIM1P49642 420 aaKnown RBP22.74■■□□□ 1.23
HLA-A-204ENST00000396634 FAM196AQ6ZSG2 479 aa22.74■■□□□ 1.23
HLA-A-204ENST00000396634 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
HLA-A-204ENST00000396634 RIPK4P57078 832 aa22.73■■□□□ 1.23
HLA-A-204ENST00000396634 NKX1-1Q15270 411 aaPredicted RBP22.73■■□□□ 1.23
HLA-A-204ENST00000396634 BTAF1O14981 1849 aa22.72■■□□□ 1.23
HLA-A-204ENST00000396634 IL17REQ8NFR9 667 aa22.72■■□□□ 1.23
HLA-A-204ENST00000396634 ADAMTS7Q9UKP4 1686 aa22.72■■□□□ 1.23
HLA-A-204ENST00000396634 TNS1Q9HBL0 1735 aaKnown RBP22.72■■□□□ 1.23
HLA-A-204ENST00000396634 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
HLA-A-204ENST00000396634 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
HLA-A-204ENST00000396634 TRIM35Q9UPQ4 493 aa22.68■■□□□ 1.22
HLA-A-204ENST00000396634 BCL9O00512 1426 aa22.68■■□□□ 1.22
HLA-A-204ENST00000396634 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
HLA-A-204ENST00000396634 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
HLA-A-204ENST00000396634 NFATC2IPQ8NCF5 419 aa22.67■■□□□ 1.22
HLA-A-204ENST00000396634 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
HLA-A-204ENST00000396634 PIGBQ92521 554 aa22.66■■□□□ 1.22
HLA-A-204ENST00000396634 CABP4P57796 275 aa22.66■■□□□ 1.22
HLA-A-204ENST00000396634 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
HLA-A-204ENST00000396634 TMOD3Q9NYL9 352 aa22.64■■□□□ 1.22
HLA-A-204ENST00000396634 MRC1P22897 1456 aa22.64■■□□□ 1.22
HLA-A-204ENST00000396634 SLC52A2Q9HAB3 445 aa22.64■■□□□ 1.21
HLA-A-204ENST00000396634 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.21
HLA-A-204ENST00000396634 BCL11BQ9C0K0 894 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms