RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
DHFR2-202ENST00000394221 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
DHFR2-202ENST00000394221 SMARCE1Q969G3 411 aa10.13□□□□□ -0.79
DHFR2-202ENST00000394221 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
DHFR2-202ENST00000394221 CALR3Q96L12 384 aaKnown RBP10.13□□□□□ -0.79
DHFR2-202ENST00000394221 DNAAF4Q8WXU2 420 aa10.13□□□□□ -0.79
DHFR2-202ENST00000394221 FHOD3Q2V2M9 1422 aa10.13□□□□□ -0.79
DHFR2-202ENST00000394221 CASKIN1Q8WXD9 1431 aa10.13□□□□□ -0.79
DHFR2-202ENST00000394221 MPHOSPH10O00566 681 aaKnown RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 RARSP54136 660 aaKnown RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 ZGPATQ8N5A5 531 aaKnown RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 TNNQ9UQP3 1299 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 PTPN14Q15678 1187 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 BMP2KLQ5H9B9 411 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 KIF14Q15058 1648 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 KIF2AO00139 706 aaPredicted RBP10.12□□□□□ -0.79
DHFR2-202ENST00000394221 CCDC186Q7Z3E2 898 aa10.12□□□□□ -0.79
DHFR2-202ENST00000394221 TRDNQ13061 729 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 RALGAPBQ86X10 1494 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 USP8P40818 1118 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 MNAT1P51948 309 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 NBPF9Q3BBW0 867 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 TTLL5Q6EMB2 1281 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 DZIP1LQ8IYY4 767 aaKnown RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 ZNF526Q8TF50 670 aaPredicted RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 ST5P78524 1137 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 ZKSCAN2Q63HK3 967 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 ATG3Q9NT62 314 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 CCDC171Q6TFL3 1326 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 CDC45O75419 566 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 TPM1P09493 284 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 LIG1P18858 919 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 GSCP56915 257 aaPredicted RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 SETQ01105 290 aaPredicted RBP10.11□□□□□ -0.79
DHFR2-202ENST00000394221 FILIP1Q7Z7B0 1213 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 GIMAP7Q8NHV1 300 aa10.11□□□□□ -0.79
DHFR2-202ENST00000394221 PTPRCP08575 1304 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 CEP89Q96ST8 783 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 KIF3CO14782 793 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 OAS2P29728 719 aaKnown RBP10.1□□□□□ -0.79
DHFR2-202ENST00000394221 GCC2Q8IWJ2 1684 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 NBPF11Q86T75 865 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
DHFR2-202ENST00000394221 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 ZNF608Q9ULD9 1512 aaPredicted RBP10.09□□□□□ -0.79
DHFR2-202ENST00000394221 ACTN2P35609 894 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 CLCN6P51797 869 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 DDX19BQ9UMR2 479 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 MRVI1Q9Y6F6 885 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 TTC36A6NLP5 189 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 EIF3CLB5ME19 914 aaKnown RBP10.09□□□□□ -0.79
DHFR2-202ENST00000394221 LRMPQ12912 555 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
DHFR2-202ENST00000394221 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
DHFR2-202ENST00000394221 GDPD2Q9HCC8 539 aa10.09□□□□□ -0.79
DHFR2-202ENST00000394221 ZNF777Q9ULD5 760 aaPredicted RBP10.09□□□□□ -0.79
DHFR2-202ENST00000394221 MX1P20591 662 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 ARID4AP29374 1257 aaPredicted RBP10.08□□□□□ -0.8
DHFR2-202ENST00000394221 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 CCDC189A1A4V9 331 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 AK9Q5TCS8 1911 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 ARHGAP29Q52LW3 1261 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 LAMC3Q9Y6N6 1575 aa10.08□□□□□ -0.8
DHFR2-202ENST00000394221 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
DHFR2-202ENST00000394221 SMC2O95347 1197 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 NUCB1Q02818 461 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 ERCC6LQ2NKX8 1250 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 TSGA10IPQ3SY00 556 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 ANKRD45Q5TZF3 282 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
DHFR2-202ENST00000394221 EXOC4Q96A65 974 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 UBXN4Q92575 508 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 KDM6BO15054 1643 aa10.07□□□□□ -0.8
DHFR2-202ENST00000394221 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
DHFR2-202ENST00000394221 H2AFXP16104 143 aaPredicted RBP10.06□□□□□ -0.8
DHFR2-202ENST00000394221 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms