RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ZKSCAN2Q63HK3 967 aa24.5■■□□□ 1.51
CLDND1-203ENST00000394181 GAS2L2Q8NHY3 880 aa24.5■■□□□ 1.51
CLDND1-203ENST00000394181 ANKRD24Q8TF21 1146 aa24.49■■□□□ 1.51
CLDND1-203ENST00000394181 PHRF1Q9P1Y6 1649 aaKnown RBP24.49■■□□□ 1.51
CLDND1-203ENST00000394181 SKAP1Q86WV1 359 aa24.49■■□□□ 1.51
CLDND1-203ENST00000394181 SPATA31A3Q5VYP0 1347 aa24.48■■□□□ 1.51
CLDND1-203ENST00000394181 TRIM27P14373 513 aa24.48■■□□□ 1.51
CLDND1-203ENST00000394181 RTF1Q92541 710 aaKnown RBP24.48■■□□□ 1.51
CLDND1-203ENST00000394181 TWISTNBQ3B726 338 aaPredicted RBP24.47■■□□□ 1.51
CLDND1-203ENST00000394181 RGPD2P0DJD1 1756 aa24.47■■□□□ 1.51
CLDND1-203ENST00000394181 TNS3Q68CZ2 1445 aa24.47■■□□□ 1.51
CLDND1-203ENST00000394181 ALDH1L2Q3SY69 923 aa24.46■■□□□ 1.51
CLDND1-203ENST00000394181 KDM2BQ8NHM5 1336 aa24.46■■□□□ 1.51
CLDND1-203ENST00000394181 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
CLDND1-203ENST00000394181 DZIP1LQ8IYY4 767 aaKnown RBP24.44■■□□□ 1.5
CLDND1-203ENST00000394181 ATF7IPQ6VMQ6 1270 aa24.44■■□□□ 1.5
CLDND1-203ENST00000394181 IL17REQ8NFR9 667 aa24.44■■□□□ 1.5
CLDND1-203ENST00000394181 MRPL50Q8N5N7 158 aaKnown RBP24.43■■□□□ 1.5
CLDND1-203ENST00000394181 CHRNA2Q15822 529 aa24.43■■□□□ 1.5
CLDND1-203ENST00000394181 FTSJ3Q8IY81 847 aaKnown RBP24.42■■□□□ 1.5
CLDND1-203ENST00000394181 ZNF428Q96B54 188 aa24.41■■□□□ 1.5
CLDND1-203ENST00000394181 MAP3K5Q99683 1374 aa24.41■■□□□ 1.5
CLDND1-203ENST00000394181 IGHDP01880 384 aa24.4■■□□□ 1.5
CLDND1-203ENST00000394181 MVPQ14764 893 aaKnown RBP24.4■■□□□ 1.5
CLDND1-203ENST00000394181 RGPD5Q99666 1765 aa24.4■■□□□ 1.5
CLDND1-203ENST00000394181 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
CLDND1-203ENST00000394181 ERBB3P21860 1342 aa24.4■■□□□ 1.5
CLDND1-203ENST00000394181 TSPYL4Q9UJ04 414 aa24.39■■□□□ 1.5
CLDND1-203ENST00000394181 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.5
CLDND1-203ENST00000394181 BRPF1P55201 1214 aaPredicted RBP24.39■■□□□ 1.49
CLDND1-203ENST00000394181 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.49
CLDND1-203ENST00000394181 KIF16BQ96L93 1317 aa24.39■■□□□ 1.49
CLDND1-203ENST00000394181 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
CLDND1-203ENST00000394181 TMEM57Q8N5G2 664 aa24.37■■□□□ 1.49
CLDND1-203ENST00000394181 CENPQQ7L2Z9 268 aaPredicted RBP24.37■■□□□ 1.49
CLDND1-203ENST00000394181 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
CLDND1-203ENST00000394181 KIAA0232Q92628 1395 aa24.36■■□□□ 1.49
CLDND1-203ENST00000394181 IPO8O15397 1037 aaKnown RBP24.36■■□□□ 1.49
CLDND1-203ENST00000394181 NCAPD2Q15021 1401 aa24.36■■□□□ 1.49
CLDND1-203ENST00000394181 ITPRIPQ8IWB1 547 aa24.35■■□□□ 1.49
CLDND1-203ENST00000394181 MS4A1P11836 297 aa24.34■■□□□ 1.49
CLDND1-203ENST00000394181 ZNF530Q6P9A1 599 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-203ENST00000394181 NLRP2Q9NX02 1062 aa24.34■■□□□ 1.49
CLDND1-203ENST00000394181 CRYBG1Q9Y4K1 1723 aa24.33■■□□□ 1.49
CLDND1-203ENST00000394181 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.48
CLDND1-203ENST00000394181 COL18A1P39060 1754 aa24.33■■□□□ 1.48
CLDND1-203ENST00000394181 LRRC37A3O60309 1634 aa24.32■■□□□ 1.48
CLDND1-203ENST00000394181 TAF7Q15545 349 aaPredicted RBP24.31■■□□□ 1.48
CLDND1-203ENST00000394181 MPRIPQ6WCQ1 1025 aa24.31■■□□□ 1.48
CLDND1-203ENST00000394181 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
CLDND1-203ENST00000394181 CSB-PGBD3P0DP91 1061 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 ARHGAP45Q92619 1136 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 CAMTA1Q9Y6Y1 1673 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 CPDO75976 1380 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 AMOTQ4VCS5 1084 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 AKAP4Q5JQC9 854 aa24.29■■□□□ 1.48
CLDND1-203ENST00000394181 DDX19BQ9UMR2 479 aa24.28■■□□□ 1.48
CLDND1-203ENST00000394181 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
CLDND1-203ENST00000394181 AAMPQ13685 434 aa24.26■■□□□ 1.47
CLDND1-203ENST00000394181 PRDM11Q9NQV5 511 aa24.25■■□□□ 1.47
CLDND1-203ENST00000394181 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
CLDND1-203ENST00000394181 SLC4A2P04920 1241 aa24.25■■□□□ 1.47
CLDND1-203ENST00000394181 KCNQ3O43525 872 aa24.24■■□□□ 1.47
CLDND1-203ENST00000394181 HAP1P54257 671 aaPredicted RBP24.24■■□□□ 1.47
CLDND1-203ENST00000394181 C1orf141Q5JVX7 400 aa24.24■■□□□ 1.47
CLDND1-203ENST00000394181 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
CLDND1-203ENST00000394181 RNMTO43148 476 aaKnown RBP24.23■■□□□ 1.47
CLDND1-203ENST00000394181 RAPGEF4Q8WZA2 1011 aa24.23■■□□□ 1.47
CLDND1-203ENST00000394181 ABCC4O15439 1325 aa24.23■■□□□ 1.47
CLDND1-203ENST00000394181 G2E3Q7L622 706 aa24.22■■□□□ 1.47
CLDND1-203ENST00000394181 MEGF6O75095 1541 aa24.22■■□□□ 1.47
CLDND1-203ENST00000394181 FAM208AQ9UK61 1670 aaKnown RBP24.22■■□□□ 1.47
CLDND1-203ENST00000394181 ZBTB7BO15156 539 aaPredicted RBP24.21■■□□□ 1.47
CLDND1-203ENST00000394181 BABAM1Q9NWV8 329 aa24.21■■□□□ 1.47
CLDND1-203ENST00000394181 NHSL1Q5SYE7 1610 aa24.21■■□□□ 1.47
CLDND1-203ENST00000394181 API5Q9BZZ5 524 aaKnown RBP24.2■■□□□ 1.47
CLDND1-203ENST00000394181 RGS12O14924 1447 aa24.2■■□□□ 1.46
CLDND1-203ENST00000394181 TATP17735 454 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-203ENST00000394181 RGS3P49796 1198 aa24.19■■□□□ 1.46
CLDND1-203ENST00000394181 TEFQ10587 303 aa24.19■■□□□ 1.46
CLDND1-203ENST00000394181 LTBP4Q8N2S1 1624 aa24.18■■□□□ 1.46
CLDND1-203ENST00000394181 BTBD11A6QL63 1104 aa24.18■■□□□ 1.46
CLDND1-203ENST00000394181 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
CLDND1-203ENST00000394181 RWDD1Q9H446 243 aaPredicted RBP24.18■■□□□ 1.46
CLDND1-203ENST00000394181 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
CLDND1-203ENST00000394181 ABCC6O95255 1503 aa24.17■■□□□ 1.46
CLDND1-203ENST00000394181 PHKG2P15735 406 aa24.15■■□□□ 1.46
CLDND1-203ENST00000394181 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.46
CLDND1-203ENST00000394181 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
CLDND1-203ENST00000394181 ABCA3Q99758 1704 aa24.14■■□□□ 1.45
CLDND1-203ENST00000394181 F6X3S4 739 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 PDE4AP27815 886 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 CCDC30Q5VVM6 783 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 SPG7Q9UQ90 795 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 PTPRCP08575 1304 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 CYP27B1O15528 508 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 INTS3Q68E01 1043 aaKnown RBP24.13■■□□□ 1.45
CLDND1-203ENST00000394181 ROBO1Q9Y6N7 1651 aa24.13■■□□□ 1.45
CLDND1-203ENST00000394181 COL5A2P05997 1499 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms