RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
CCDC50-201ENST00000392455 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
CCDC50-201ENST00000392455 RAB3IL1Q8TBN0 382 aa17.19■□□□□ 0.34
CCDC50-201ENST00000392455 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
CCDC50-201ENST00000392455 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 KIF5CO60282 957 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 GPRASP1Q5JY77 1395 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 CNTLNQ9NXG0 1405 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 GOLGA6L9A6NEM1 432 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
CCDC50-201ENST00000392455 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 KIF3CO14782 793 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 PPP1R1BQ9UD71 204 aaPredicted RBP17.17■□□□□ 0.34
CCDC50-201ENST00000392455 MKRN1Q9UHC7 482 aaKnown RBP17.17■□□□□ 0.34
CCDC50-201ENST00000392455 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
CCDC50-201ENST00000392455 CETN1Q12798 172 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 GNAI3P08754 354 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 TUBB4BP68371 445 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
CCDC50-201ENST00000392455 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 USH1CQ9Y6N9 552 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 CNGA1P29973 690 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 CEP135Q66GS9 1140 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 TRAK2O60296 914 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
CCDC50-201ENST00000392455 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 KIF18AQ8NI77 898 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 MPHOSPH10O00566 681 aaKnown RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 STMN4Q9H169 189 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 NSRP1Q9H0G5 558 aaKnown RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 PHAXQ9H814 394 aaKnown RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
CCDC50-201ENST00000392455 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 PAFAH1B1P43034 410 aa17.15■□□□□ 0.34
CCDC50-201ENST00000392455 TSG101Q99816 390 aa17.14■□□□□ 0.34
CCDC50-201ENST00000392455 IKBKGQ9Y6K9 419 aa17.14■□□□□ 0.34
CCDC50-201ENST00000392455 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
CCDC50-201ENST00000392455 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 EIF5P55010 431 aaKnown RBP17.14■□□□□ 0.33
CCDC50-201ENST00000392455 ANKS4BQ8N8V4 417 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 NAP1L3Q99457 506 aaPredicted RBP17.14■□□□□ 0.33
CCDC50-201ENST00000392455 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.33
CCDC50-201ENST00000392455 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 COMMD10Q9Y6G5 202 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 MTHFSP49914 203 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 GAS2L2Q8NHY3 880 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 KRT32Q14532 448 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
CCDC50-201ENST00000392455 NEMFO60524 1076 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 FAM193AP78312 1265 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 IFI16Q16666 785 aaKnown RBP17.13■□□□□ 0.33
CCDC50-201ENST00000392455 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-201ENST00000392455 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 EHBP1Q8NDI1 1231 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 ME1P48163 572 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
CCDC50-201ENST00000392455 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
CCDC50-201ENST00000392455 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
CCDC50-201ENST00000392455 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
CCDC50-201ENST00000392455 CTNNA3Q9UI47 895 aa17.12■□□□□ 0.33
CCDC50-201ENST00000392455 ALS2CR12Q96Q35 445 aa17.12■□□□□ 0.33
CCDC50-201ENST00000392455 SSR1P43307 286 aaKnown RBP17.12■□□□□ 0.33
CCDC50-201ENST00000392455 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-201ENST00000392455 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 CASQ1P31415 396 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-201ENST00000392455 IVLP07476 585 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 CCDC110Q8TBZ0 833 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
CCDC50-201ENST00000392455 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-201ENST00000392455 GNAI2P04899 355 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 NEK4P51957 841 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 CCDC14Q49A88 953 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 HSPA4P34932 840 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 TTC14Q96N46 770 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 UQCRHLA0A096LP55 91 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 UQCRHP07919 91 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
CCDC50-201ENST00000392455 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
CCDC50-201ENST00000392455 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
CCDC50-201ENST00000392455 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
CCDC50-201ENST00000392455 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
CCDC50-201ENST00000392455 KIF4AO95239 1232 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms