RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 TATP17735 454 aaPredicted RBP33.94■■■■□ 3.02
HOMER3-202ENST00000392351 DDB1Q16531 1140 aa33.92■■■■□ 3.02
HOMER3-202ENST00000392351 MRS2Q9HD23 443 aa33.91■■■■□ 3.02
HOMER3-202ENST00000392351 TNS2Q63HR2 1409 aa33.91■■■■□ 3.02
HOMER3-202ENST00000392351 PKD1L3Q7Z443 1732 aa33.9■■■■□ 3.02
HOMER3-202ENST00000392351 SHANK3Q9BYB0 1731 aa33.9■■■■□ 3.02
HOMER3-202ENST00000392351 EXOC5O00471 708 aa33.88■■■■□ 3.01
HOMER3-202ENST00000392351 PDE3BQ13370 1112 aa33.85■■■■□ 3.01
HOMER3-202ENST00000392351 WDR43Q15061 677 aaKnown RBP eCLIP33.85■■■■□ 3.01
HOMER3-202ENST00000392351 KRT27Q7Z3Y8 459 aa33.85■■■■□ 3.01
HOMER3-202ENST00000392351 PLEKHG2Q9H7P9 1386 aa33.84■■■■□ 3.01
HOMER3-202ENST00000392351 MIER1Q8N108 512 aa33.84■■■■□ 3.01
HOMER3-202ENST00000392351 ZCRB1Q8TBF4 217 aaKnown RBP33.84■■■■□ 3.01
HOMER3-202ENST00000392351 RSPH6AQ9H0K4 717 aa33.84■■■■□ 3.01
HOMER3-202ENST00000392351 FCHSD2O94868 740 aa33.82■■■■□ 3
HOMER3-202ENST00000392351 PRKAR2BP31323 418 aa33.81■■■■□ 3
HOMER3-202ENST00000392351 EP400Q96L91 3159 aa33.81■■■■□ 3
HOMER3-202ENST00000392351 SPG7Q9UQ90 795 aa33.8■■■■□ 3
HOMER3-202ENST00000392351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.79■■■■□ 3
HOMER3-202ENST00000392351 PLEKHO1Q53GL0 409 aaPredicted RBP33.78■■■■□ 3
HOMER3-202ENST00000392351 DDX54Q8TDD1 881 aaKnown RBP33.78■■■■□ 3
HOMER3-202ENST00000392351 PCDH11XQ9BZA7 1347 aa33.78■■■■□ 3
HOMER3-202ENST00000392351 PCDH11YQ9BZA8 1340 aa33.78■■■■□ 3
HOMER3-202ENST00000392351 FAM182BQ5T319 152 aa33.77■■■■□ 3
HOMER3-202ENST00000392351 MARCH10Q8NA82 808 aaPredicted RBP33.77■■■■□ 3
HOMER3-202ENST00000392351 CCER2I3L3R5 266 aa33.77■■■■□ 3
HOMER3-202ENST00000392351 AMOTQ4VCS5 1084 aa33.77■■■■□ 3
HOMER3-202ENST00000392351 ADAMTS8Q9UP79 889 aa33.77■■■■□ 3
HOMER3-202ENST00000392351 PNISRQ8TF01 805 aaKnown RBP33.75■■■□□ 2.99
HOMER3-202ENST00000392351 CYP27B1O15528 508 aa33.72■■■□□ 2.99
HOMER3-202ENST00000392351 PHACTR3Q96KR7 559 aa33.72■■■□□ 2.99
HOMER3-202ENST00000392351 PNNQ9H307 717 aaKnown RBP33.72■■■□□ 2.99
HOMER3-202ENST00000392351 ZNF530Q6P9A1 599 aaPredicted RBP33.72■■■□□ 2.99
HOMER3-202ENST00000392351 PLEKHF1Q96S99 279 aa33.71■■■□□ 2.99
HOMER3-202ENST00000392351 KAT6BQ8WYB5 2073 aa33.71■■■□□ 2.99
HOMER3-202ENST00000392351 NEFMP07197 916 aa33.7■■■□□ 2.99
HOMER3-202ENST00000392351 MTHFSDQ2M296 383 aaKnown RBP33.7■■■□□ 2.99
HOMER3-202ENST00000392351 SBF2Q86WG5 1849 aa33.68■■■□□ 2.98
HOMER3-202ENST00000392351 CCDC146Q8IYE0 955 aa33.68■■■□□ 2.98
HOMER3-202ENST00000392351 IFNL2Q8IZJ0 200 aa33.68■■■□□ 2.98
HOMER3-202ENST00000392351 MAPK8IP3Q9UPT6 1336 aa33.68■■■□□ 2.98
HOMER3-202ENST00000392351 PHKG2P15735 406 aa33.67■■■□□ 2.98
HOMER3-202ENST00000392351 C1orf141Q5JVX7 400 aa33.66■■■□□ 2.98
HOMER3-202ENST00000392351 FAM196AQ6ZSG2 479 aa33.66■■■□□ 2.98
HOMER3-202ENST00000392351 DOT1LQ8TEK3 1739 aa33.66■■■□□ 2.98
HOMER3-202ENST00000392351 VIRMAQ69YN4 1812 aaKnown RBP33.66■■■□□ 2.98
HOMER3-202ENST00000392351 FAM9BQ8IZU0 186 aa33.65■■■□□ 2.98
HOMER3-202ENST00000392351 GAS2L2Q8NHY3 880 aa33.65■■■□□ 2.98
HOMER3-202ENST00000392351 DLG5Q8TDM6 1919 aa33.64■■■□□ 2.98
HOMER3-202ENST00000392351 BCL9O00512 1426 aa33.63■■■□□ 2.97
HOMER3-202ENST00000392351 RUNDC1Q96C34 613 aa33.63■■■□□ 2.97
HOMER3-202ENST00000392351 TOGARAM1Q9Y4F4 1720 aa33.62■■■□□ 2.97
HOMER3-202ENST00000392351 AKAP4Q5JQC9 854 aa33.61■■■□□ 2.97
HOMER3-202ENST00000392351 NKX1-1Q15270 411 aaPredicted RBP33.6■■■□□ 2.97
HOMER3-202ENST00000392351 SCN11AQ9UI33 1791 aa33.59■■■□□ 2.97
HOMER3-202ENST00000392351 HSP90AB1P08238 724 aaKnown RBP33.58■■■□□ 2.97
HOMER3-202ENST00000392351 NHSQ6T4R5 1651 aa33.58■■■□□ 2.97
HOMER3-202ENST00000392351 MAP3K5Q99683 1374 aa33.58■■■□□ 2.97
HOMER3-202ENST00000392351 ACSBG1Q96GR2 724 aa33.57■■■□□ 2.96
HOMER3-202ENST00000392351 ITGB4P16144 1822 aa33.57■■■□□ 2.96
HOMER3-202ENST00000392351 KDM6AO15550 1401 aaPredicted RBP33.56■■■□□ 2.96
HOMER3-202ENST00000392351 NFE2L2Q16236 605 aa33.55■■■□□ 2.96
HOMER3-202ENST00000392351 MPRIPQ6WCQ1 1025 aa33.55■■■□□ 2.96
HOMER3-202ENST00000392351 DCAF5Q96JK2 942 aa33.55■■■□□ 2.96
HOMER3-202ENST00000392351 GNAT3A8MTJ3 354 aa33.55■■■□□ 2.96
HOMER3-202ENST00000392351 ADAMTS7Q9UKP4 1686 aa33.53■■■□□ 2.96
HOMER3-202ENST00000392351 TRIM37O94972 964 aa33.52■■■□□ 2.96
HOMER3-202ENST00000392351 SYTL4Q96C24 671 aaPredicted RBP33.51■■■□□ 2.96
HOMER3-202ENST00000392351 TNS1Q9HBL0 1735 aaKnown RBP33.51■■■□□ 2.96
HOMER3-202ENST00000392351 KCNQ2O43526 872 aa33.51■■■□□ 2.95
HOMER3-202ENST00000392351 TMPOP42166 694 aaKnown RBP33.51■■■□□ 2.95
HOMER3-202ENST00000392351 RRP7AQ9Y3A4 280 aaKnown RBP33.51■■■□□ 2.95
HOMER3-202ENST00000392351 PRIM1P49642 420 aaKnown RBP33.5■■■□□ 2.95
HOMER3-202ENST00000392351 APAF1O14727 1248 aa33.49■■■□□ 2.95
HOMER3-202ENST00000392351 LGR6Q9HBX8 967 aa33.49■■■□□ 2.95
HOMER3-202ENST00000392351 BTAF1O14981 1849 aa33.49■■■□□ 2.95
HOMER3-202ENST00000392351 RIPK4P57078 832 aa33.48■■■□□ 2.95
HOMER3-202ENST00000392351 NEUROD2Q15784 382 aa33.48■■■□□ 2.95
HOMER3-202ENST00000392351 PTF1AQ7RTS3 328 aa33.48■■■□□ 2.95
HOMER3-202ENST00000392351 RNMTO43148 476 aaKnown RBP33.47■■■□□ 2.95
HOMER3-202ENST00000392351 RTF1Q92541 710 aaKnown RBP33.47■■■□□ 2.95
HOMER3-202ENST00000392351 BCL11BQ9C0K0 894 aaPredicted RBP33.46■■■□□ 2.95
HOMER3-202ENST00000392351 ERVV-2B6SEH9 535 aa33.45■■■□□ 2.95
HOMER3-202ENST00000392351 IL17REQ8NFR9 667 aa33.45■■■□□ 2.95
HOMER3-202ENST00000392351 HTATSF1O43719 755 aaKnown RBP33.44■■■□□ 2.94
HOMER3-202ENST00000392351 MCM10Q7L590 875 aa33.44■■■□□ 2.94
HOMER3-202ENST00000392351 SENP3-EIF4A1A0A087X0R7 540 aa33.43■■■□□ 2.94
HOMER3-202ENST00000392351 DCTN1Q14203 1278 aa33.43■■■□□ 2.94
HOMER3-202ENST00000392351 MRC1P22897 1456 aa33.43■■■□□ 2.94
HOMER3-202ENST00000392351 TMOD3Q9NYL9 352 aa33.43■■■□□ 2.94
HOMER3-202ENST00000392351 CEMIPQ8WUJ3 1361 aa33.42■■■□□ 2.94
HOMER3-202ENST00000392351 CABP4P57796 275 aa33.42■■■□□ 2.94
HOMER3-202ENST00000392351 UPF1Q92900 1129 aaKnown RBP eCLIP33.42■■■□□ 2.94
HOMER3-202ENST00000392351 SIPA1L3O60292 1781 aaPredicted RBP33.41■■■□□ 2.94
HOMER3-202ENST00000392351 LMOD3Q0VAK6 560 aa33.4■■■□□ 2.94
HOMER3-202ENST00000392351 SF3B2Q13435 895 aaKnown RBP33.39■■■□□ 2.94
HOMER3-202ENST00000392351 CCDC125Q86Z20 511 aa33.39■■■□□ 2.94
HOMER3-202ENST00000392351 PIGBQ92521 554 aa33.39■■■□□ 2.94
HOMER3-202ENST00000392351 SLC52A2Q9HAB3 445 aa33.39■■■□□ 2.94
HOMER3-202ENST00000392351 NFATC2IPQ8NCF5 419 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms