RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 NSD2O96028 1365 aa13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 ZNF827Q17R98 1081 aa13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
TPM3P6-201ENST00000391998 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
TPM3P6-201ENST00000391998 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
TPM3P6-201ENST00000391998 PNPLA7Q6ZV29 1317 aa13.45□□□□□ -0.26
TPM3P6-201ENST00000391998 FYB1O15117 783 aa13.45□□□□□ -0.26
TPM3P6-201ENST00000391998 INSRP06213 1382 aa13.45□□□□□ -0.26
TPM3P6-201ENST00000391998 WNK3Q9BYP7 1800 aa13.44□□□□□ -0.26
TPM3P6-201ENST00000391998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM3P6-201ENST00000391998 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
TPM3P6-201ENST00000391998 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
TPM3P6-201ENST00000391998 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
TPM3P6-201ENST00000391998 FLT4P35916 1363 aa13.43□□□□□ -0.26
TPM3P6-201ENST00000391998 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
TPM3P6-201ENST00000391998 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
TPM3P6-201ENST00000391998 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
TPM3P6-201ENST00000391998 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
TPM3P6-201ENST00000391998 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
TPM3P6-201ENST00000391998 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
TPM3P6-201ENST00000391998 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
TPM3P6-201ENST00000391998 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
TPM3P6-201ENST00000391998 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
TPM3P6-201ENST00000391998 MYOM1P52179 1685 aa13.38□□□□□ -0.27
TPM3P6-201ENST00000391998 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
TPM3P6-201ENST00000391998 UTRNP46939 3433 aa13.37□□□□□ -0.27
TPM3P6-201ENST00000391998 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
TPM3P6-201ENST00000391998 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
TPM3P6-201ENST00000391998 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
TPM3P6-201ENST00000391998 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
TPM3P6-201ENST00000391998 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
TPM3P6-201ENST00000391998 MEGF6O75095 1541 aa13.36□□□□□ -0.27
TPM3P6-201ENST00000391998 SSFA2P28290 1259 aa13.36□□□□□ -0.27
TPM3P6-201ENST00000391998 AK7Q96M32 723 aa13.36□□□□□ -0.27
TPM3P6-201ENST00000391998 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
TPM3P6-201ENST00000391998 MPRIPQ6WCQ1 1025 aa13.35□□□□□ -0.27
TPM3P6-201ENST00000391998 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 TRIM26Q12899 539 aaPredicted RBP13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 BTAF1O14981 1849 aa13.34□□□□□ -0.27
TPM3P6-201ENST00000391998 LTN1O94822 1766 aa13.33□□□□□ -0.28
TPM3P6-201ENST00000391998 CYP27B1O15528 508 aa13.33□□□□□ -0.28
TPM3P6-201ENST00000391998 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
TPM3P6-201ENST00000391998 FBLN1P23142 703 aa13.32□□□□□ -0.28
TPM3P6-201ENST00000391998 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
TPM3P6-201ENST00000391998 QSER1Q2KHR3 1735 aa13.32□□□□□ -0.28
TPM3P6-201ENST00000391998 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 ERVV-2B6SEH9 535 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 KCNQ4P56696 695 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 SIK1P57059 783 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 PIGBQ92521 554 aa13.31□□□□□ -0.28
TPM3P6-201ENST00000391998 AMOTQ4VCS5 1084 aa13.3□□□□□ -0.28
TPM3P6-201ENST00000391998 NLGN1Q8N2Q7 840 aa13.3□□□□□ -0.28
TPM3P6-201ENST00000391998 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
TPM3P6-201ENST00000391998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.29□□□□□ -0.28
TPM3P6-201ENST00000391998 TGFB2P61812 414 aa13.29□□□□□ -0.28
TPM3P6-201ENST00000391998 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
TPM3P6-201ENST00000391998 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 EYA1Q99502 592 aa13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
TPM3P6-201ENST00000391998 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.28
TPM3P6-201ENST00000391998 PHKG2P15735 406 aa13.27□□□□□ -0.29
TPM3P6-201ENST00000391998 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
TPM3P6-201ENST00000391998 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
TPM3P6-201ENST00000391998 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
TPM3P6-201ENST00000391998 KAT6BQ8WYB5 2073 aa13.27□□□□□ -0.29
TPM3P6-201ENST00000391998 LY75O60449 1722 aa13.26□□□□□ -0.29
TPM3P6-201ENST00000391998 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
TPM3P6-201ENST00000391998 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
TPM3P6-201ENST00000391998 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
TPM3P6-201ENST00000391998 GNPATO15228 680 aa13.24□□□□□ -0.29
TPM3P6-201ENST00000391998 CHD4Q14839 1912 aa13.23□□□□□ -0.29
TPM3P6-201ENST00000391998 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
TPM3P6-201ENST00000391998 PHF14O94880 888 aa13.23□□□□□ -0.29
TPM3P6-201ENST00000391998 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM3P6-201ENST00000391998 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
TPM3P6-201ENST00000391998 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 ADCY9O60503 1353 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 CNTNAP4Q9C0A0 1308 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 LINC00116Q8NCU8 138 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
TPM3P6-201ENST00000391998 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms