RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 ABTB2Q8N961 1025 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 STRN4Q9NRL3 753 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 CAMTA1Q9Y6Y1 1673 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 NFAT5O94916 1531 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 KTN1Q86UP2 1357 aaKnown RBP9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
TRAV12-3-201ENST00000390442 SPATA31A1Q5TZJ5 1347 aa9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 SLC24A3Q9HC58 644 aa9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 NINLQ9Y2I6 1382 aa9.84□□□□□ -0.83
TRAV12-3-201ENST00000390442 TTC21AQ8NDW8 1320 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 EDC4Q6P2E9 1401 aaKnown RBP9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 GCP02774 474 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 TMF1P82094 1093 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 PDE3BQ13370 1112 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 CARD14Q9BXL6 1004 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
TRAV12-3-201ENST00000390442 NLRP6P59044 892 aa9.82□□□□□ -0.84
TRAV12-3-201ENST00000390442 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAV12-3-201ENST00000390442 NME9Q86XW9 330 aa9.82□□□□□ -0.84
TRAV12-3-201ENST00000390442 RGPD5Q99666 1765 aa9.82□□□□□ -0.84
TRAV12-3-201ENST00000390442 ZC3H6P61129 1189 aaKnown RBP9.81□□□□□ -0.84
TRAV12-3-201ENST00000390442 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
TRAV12-3-201ENST00000390442 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
TRAV12-3-201ENST00000390442 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
TRAV12-3-201ENST00000390442 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
TRAV12-3-201ENST00000390442 EVA1CP58658 441 aa9.8□□□□□ -0.84
TRAV12-3-201ENST00000390442 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
TRAV12-3-201ENST00000390442 COL5A2P05997 1499 aaPredicted RBP9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 AATKQ6ZMQ8 1374 aa9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 FYB1O15117 783 aa9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 KCNQ2O43526 872 aa9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 TERF2IPQ9NYB0 399 aa9.79□□□□□ -0.84
TRAV12-3-201ENST00000390442 LTN1O94822 1766 aa9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 ZMYND10O75800 440 aa9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
TRAV12-3-201ENST00000390442 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.84
TRAV12-3-201ENST00000390442 PARP4Q9UKK3 1724 aaKnown RBP9.77□□□□□ -0.85
TRAV12-3-201ENST00000390442 FBLN1P23142 703 aa9.77□□□□□ -0.85
TRAV12-3-201ENST00000390442 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
TRAV12-3-201ENST00000390442 LARP1Q6PKG0 1096 aaKnown RBP9.77□□□□□ -0.85
TRAV12-3-201ENST00000390442 ABCC6O95255 1503 aa9.77□□□□□ -0.85
TRAV12-3-201ENST00000390442 RGPD3A6NKT7 1758 aaPredicted RBP9.76□□□□□ -0.85
TRAV12-3-201ENST00000390442 RGPD4Q7Z3J3 1758 aa9.76□□□□□ -0.85
TRAV12-3-201ENST00000390442 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
TRAV12-3-201ENST00000390442 OVOS2A0A0G2JMS6 1433 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 E2F4Q16254 413 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 SMYD5Q6GMV2 418 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 KCNH5Q8NCM2 988 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 UTRNP46939 3433 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 PEAK1Q9H792 1746 aa9.75□□□□□ -0.85
TRAV12-3-201ENST00000390442 NSD3Q9BZ95 1437 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 CASZ1Q86V15 1759 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 SBF2Q86WG5 1849 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 WNK3Q9BYP7 1800 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 WASHC2AQ641Q2 1341 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
TRAV12-3-201ENST00000390442 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
TRAV12-3-201ENST00000390442 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
TRAV12-3-201ENST00000390442 ANO8Q9HCE9 1232 aaPredicted RBP9.73□□□□□ -0.85
TRAV12-3-201ENST00000390442 CRB1P82279 1406 aa9.73□□□□□ -0.85
TRAV12-3-201ENST00000390442 SOX12O15370 315 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 PANK3Q9H999 370 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 MAP3K19Q56UN5 1328 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 WDR17Q8IZU2 1322 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 RGPD2P0DJD1 1756 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
TRAV12-3-201ENST00000390442 MAP2P11137 1827 aaKnown RBP9.71□□□□□ -0.85
TRAV12-3-201ENST00000390442 SEMA3EO15041 775 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 PLSCR1O15162 318 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 ZBTB7AO95365 584 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 DDB1Q16531 1140 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 IP6K1Q92551 441 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 ERBB3P21860 1342 aa9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.86
TRAV12-3-201ENST00000390442 COG3Q96JB2 828 aa9.7□□□□□ -0.86
TRAV12-3-201ENST00000390442 CHD4Q14839 1912 aa9.7□□□□□ -0.86
TRAV12-3-201ENST00000390442 SENP3-EIF4A1A0A087X0R7 540 aa9.69□□□□□ -0.86
TRAV12-3-201ENST00000390442 HOXC9P31274 260 aa9.69□□□□□ -0.86
TRAV12-3-201ENST00000390442 PDAP1Q13442 181 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms