RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NEDD1Q8NHV4 660 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 RNF217Q8TC41 542 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 LRRN4Q8WUT4 740 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 GPKOWQ92917 476 aaPredicted RBP eCLIP1.69□□□□□ -2.14
SNORD28-201ENST00000384706 DCAF5Q96JK2 942 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 AK7Q96M32 723 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 FKBPLQ9UIM3 349 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 PHF20L1A8MW92 1017 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 ERVH48-1M5A8F1 160 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 ITGB7P26010 798 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 PTGIRP43119 386 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 BAG6P46379 1132 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 CLK2P49760 499 aaKnown RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 PTK2Q05397 1052 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 PDE4DQ08499 809 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 GAS6Q14393 721 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 NR6A1Q15406 480 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 TUSC1Q2TAM9 212 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 FOXR1Q6PIV2 292 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 PODNQ7Z5L7 613 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 DZIP3Q86Y13 1208 aaKnown RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 ZNF784Q8NCA9 323 aaPredicted RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 GALNT6Q8NCL4 622 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 ADAM32Q8TC27 787 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 GAS2L1Q99501 681 aaPredicted RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 RSPH6AQ9H0K4 717 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 CUEDC1Q9NWM3 386 aaPredicted RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 CDV3Q9UKY7 258 aaKnown RBP1.68□□□□□ -2.14
SNORD28-201ENST00000384706 IGF1RP08069 1367 aa1.68□□□□□ -2.14
SNORD28-201ENST00000384706 MEN1O00255 615 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 AP1G2O75843 785 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 ADH1AP07327 375 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 BCRP11274 1271 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 POU4F2Q12837 409 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 DBN1Q16643 649 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 NBPF20Q3BBV1 942 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 FOXD4L5Q5VV16 416 aaPredicted RBP1.67□□□□□ -2.14
SNORD28-201ENST00000384706 TRIM22Q8IYM9 498 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 KDF1Q8NAX2 398 aaPredicted RBP1.67□□□□□ -2.14
SNORD28-201ENST00000384706 PROCA1Q8NCQ7 364 aaPredicted RBP1.67□□□□□ -2.14
SNORD28-201ENST00000384706 EPS8L1Q8TE68 723 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 GTPBP3Q969Y2 492 aaKnown RBP1.67□□□□□ -2.14
SNORD28-201ENST00000384706 ZNF837Q96EG3 531 aaPredicted RBP1.67□□□□□ -2.14
SNORD28-201ENST00000384706 CYLDQ9NQC7 956 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 MBIPQ9NS73 344 aa1.67□□□□□ -2.14
SNORD28-201ENST00000384706 A0A1W2PRU2 124 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 ATP5J2-PTCD1G3V325 749 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 H7C1W4 665 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 LILRA1O75019 489 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 COBLO75128 1261 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 FURINP09958 794 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 MX2P20592 715 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 RNF144AP50876 292 aaPredicted RBP1.66□□□□□ -2.14
SNORD28-201ENST00000384706 SLC27A3Q5K4L6 730 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 FBXO31Q5XUX0 539 aaPredicted RBP1.66□□□□□ -2.14
SNORD28-201ENST00000384706 ACDQ96AP0 544 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 GMCL1Q96IK5 515 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 NLRP3Q96P20 1036 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 TRERF1Q96PN7 1200 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 OCSTAMPQ9BR26 566 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 RRAGCQ9HB90 399 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 SLC24A3Q9HC58 644 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 NSFL1CQ9UNZ2 370 aaKnown RBP1.66□□□□□ -2.14
SNORD28-201ENST00000384706 GPSM3Q9Y4H4 160 aa1.66□□□□□ -2.14
SNORD28-201ENST00000384706 ZC3H4Q9UPT8 1303 aaKnown RBP1.66□□□□□ -2.14
SNORD28-201ENST00000384706 KRBA1A5PL33 1030 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 OIP5O43482 229 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 GIGYF1O75420 1035 aaPredicted RBP1.65□□□□□ -2.15
SNORD28-201ENST00000384706 F11P03951 625 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 AMPD1P23109 780 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 SNRPNP63162 240 aaKnown RBP1.65□□□□□ -2.15
SNORD28-201ENST00000384706 SKIV2LQ15477 1246 aaKnown RBP1.65□□□□□ -2.15
SNORD28-201ENST00000384706 PPP2R2DQ66LE6 453 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 PNMA1Q8ND90 353 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 TRIM52Q96A61 297 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 ESF1Q9H501 851 aaKnown RBP1.65□□□□□ -2.15
SNORD28-201ENST00000384706 TIMMDC1Q9NPL8 285 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 DYRK1BQ9Y463 629 aa1.65□□□□□ -2.15
SNORD28-201ENST00000384706 ESPNB1AK53 854 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 YBX3P16989 372 aaKnown RBP eCLIP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 COL8A1P27658 744 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 GPC1P35052 558 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 PHKA2P46019 1235 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 MAP2K3P46734 347 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 GRIN2CQ14957 1233 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 NBPF10Q6P3W6 841 aaKnown RBP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 SEPT12Q8IYM1 358 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 NBPF15Q8N660 670 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 EDARADDQ8WWZ3 215 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 KLRG1Q96E93 195 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 OXCT2Q9BYC2 517 aaPredicted RBP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 GRIP2Q9C0E4 1043 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 NUCKS1Q9H1E3 243 aaKnown RBP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 GPAMQ9HCL2 828 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 HMX1Q9NP08 348 aaPredicted RBP1.64□□□□□ -2.15
SNORD28-201ENST00000384706 MKL2Q9ULH7 1088 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 PCDHB9Q9Y5E1 797 aa1.64□□□□□ -2.15
SNORD28-201ENST00000384706 ZBBXA8MT70 800 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 C1QTNF9BB2RNN3 333 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms