RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PLCH1Q4KWH8 1693 aa14.69□□□□□ -0.06
TSPAN1-201ENST00000372003 LMO7Q8WWI1 1683 aa14.69□□□□□ -0.06
TSPAN1-201ENST00000372003 SPATA31A5Q5VU36 1347 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 SPATA31A7Q8IWB4 1347 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 LTN1O94822 1766 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 COL18A1P39060 1754 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 PLIN1O60240 522 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 RXRBP28702 533 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 USHBP1Q8N6Y0 703 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 ATRNO75882 1429 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 PEAK1Q9H792 1746 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
TSPAN1-201ENST00000372003 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 A0A0G2JS52 829 aa14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 DIAPH1O60610 1272 aaKnown RBP14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 RBM6P78332 1123 aaKnown RBP14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 C8orf34Q49A92 452 aa14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 CRB1P82279 1406 aa14.67□□□□□ -0.06
TSPAN1-201ENST00000372003 PRKCSHP14314 528 aaPredicted RBP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 FAM98CQ17RN3 349 aaKnown RBP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 TCP11L2Q8N4U5 519 aa14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 CARD10Q9BWT7 1032 aa14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 IL13P35225 146 aa14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 EYA1Q99502 592 aa14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 ADAMTS8Q9UP79 889 aa14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 CDK12Q9NYV4 1490 aaPredicted RBP14.66□□□□□ -0.06
TSPAN1-201ENST00000372003 ABCC6O95255 1503 aa14.65□□□□□ -0.06
TSPAN1-201ENST00000372003 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
TSPAN1-201ENST00000372003 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
TSPAN1-201ENST00000372003 SLFN5Q08AF3 891 aa14.64□□□□□ -0.07
TSPAN1-201ENST00000372003 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
TSPAN1-201ENST00000372003 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
TSPAN1-201ENST00000372003 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
TSPAN1-201ENST00000372003 AAMPQ13685 434 aa14.63□□□□□ -0.07
TSPAN1-201ENST00000372003 C20orf194Q5TEA3 1177 aa14.63□□□□□ -0.07
TSPAN1-201ENST00000372003 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
TSPAN1-201ENST00000372003 HMOX1P09601 288 aa14.62□□□□□ -0.07
TSPAN1-201ENST00000372003 SULT6B1Q6IMI4 303 aa14.62□□□□□ -0.07
TSPAN1-201ENST00000372003 IL2RBP14784 551 aa14.61□□□□□ -0.07
TSPAN1-201ENST00000372003 BARGINQ6ZT62 677 aa14.61□□□□□ -0.07
TSPAN1-201ENST00000372003 SEPT12Q8IYM1 358 aa14.61□□□□□ -0.07
TSPAN1-201ENST00000372003 U2AF1L5P0DN76 240 aaPredicted RBP14.6□□□□□ -0.07
TSPAN1-201ENST00000372003 U2AF1Q01081 240 aaKnown RBP eCLIP14.6□□□□□ -0.07
TSPAN1-201ENST00000372003 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
TSPAN1-201ENST00000372003 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
TSPAN1-201ENST00000372003 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.6□□□□□ -0.07
TSPAN1-201ENST00000372003 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 MAPK8IP3Q9UPT6 1336 aa14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 ONECUT3O60422 494 aaPredicted RBP14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 GLI3P10071 1580 aa14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 PDE3AQ14432 1141 aa14.59□□□□□ -0.07
TSPAN1-201ENST00000372003 E9PSI1 815 aa14.58□□□□□ -0.08
TSPAN1-201ENST00000372003 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
TSPAN1-201ENST00000372003 EXOC5O00471 708 aa14.57□□□□□ -0.08
TSPAN1-201ENST00000372003 DDB1Q16531 1140 aa14.57□□□□□ -0.08
TSPAN1-201ENST00000372003 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
TSPAN1-201ENST00000372003 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
TSPAN1-201ENST00000372003 BECN1Q14457 450 aa14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 RGS12O14924 1447 aa14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 FAM182BQ5T319 152 aa14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 ZCRB1Q8TBF4 217 aaKnown RBP14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
TSPAN1-201ENST00000372003 DISP2A7MBM2 1401 aa14.54□□□□□ -0.08
TSPAN1-201ENST00000372003 ILDR2Q71H61 639 aa14.54□□□□□ -0.08
TSPAN1-201ENST00000372003 MEGF6O75095 1541 aa14.54□□□□□ -0.08
TSPAN1-201ENST00000372003 RGPD2P0DJD1 1756 aa14.54□□□□□ -0.08
TSPAN1-201ENST00000372003 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
TSPAN1-201ENST00000372003 KRT27Q7Z3Y8 459 aa14.53□□□□□ -0.08
TSPAN1-201ENST00000372003 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
TSPAN1-201ENST00000372003 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
TSPAN1-201ENST00000372003 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
TSPAN1-201ENST00000372003 KDRP35968 1356 aa14.52□□□□□ -0.08
TSPAN1-201ENST00000372003 NCAPD2Q15021 1401 aa14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 FCHSD2O94868 740 aa14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
TSPAN1-201ENST00000372003 FAM208AQ9UK61 1670 aaKnown RBP14.51□□□□□ -0.09
TSPAN1-201ENST00000372003 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
TSPAN1-201ENST00000372003 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
TSPAN1-201ENST00000372003 MARCH10Q8NA82 808 aaPredicted RBP14.51□□□□□ -0.09
TSPAN1-201ENST00000372003 OVOS2A0A0G2JMS6 1433 aa14.5□□□□□ -0.09
TSPAN1-201ENST00000372003 CCDC146Q8IYE0 955 aa14.5□□□□□ -0.09
TSPAN1-201ENST00000372003 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
TSPAN1-201ENST00000372003 RGS3P49796 1198 aa14.49□□□□□ -0.09
TSPAN1-201ENST00000372003 AMOTQ4VCS5 1084 aa14.49□□□□□ -0.09
TSPAN1-201ENST00000372003 CYP27B1O15528 508 aa14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 MTHFSDQ2M296 383 aaKnown RBP14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 ZNF530Q6P9A1 599 aaPredicted RBP14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms