RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 EXOC6BQ9Y2D4 811 aa14.95□□□□□ -0.02
GPC4-201ENST00000370828 CSB-PGBD3P0DP91 1061 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 CASTP20810 708 aaKnown RBP14.94□□□□□ -0.02
GPC4-201ENST00000370828 CFAP100Q494V2 611 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 TMX1Q9H3N1 280 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 NOL7Q9UMY1 257 aaKnown RBP14.94□□□□□ -0.02
GPC4-201ENST00000370828 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 PAXBP1Q9Y5B6 917 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
GPC4-201ENST00000370828 MAPKBP1O60336 1514 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
GPC4-201ENST00000370828 BLOC1S2Q6QNY1 142 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 CCDC186Q7Z3E2 898 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
GPC4-201ENST00000370828 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
GPC4-201ENST00000370828 NEUROD6Q96NK8 337 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 CFAP45Q9UL16 551 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 CBFA2T2O43439 604 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 DDX11Q96FC9 970 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 TRIM34Q9BYJ4 488 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 RBSNQ9H1K0 784 aa14.93□□□□□ -0.02
GPC4-201ENST00000370828 PRXQ9BXM0 1461 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 CNPY4Q8N129 248 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 MPHOSPH10O00566 681 aaKnown RBP14.92□□□□□ -0.02
GPC4-201ENST00000370828 CT47A1Q5JQC4 288 aaPredicted RBP14.92□□□□□ -0.02
GPC4-201ENST00000370828 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
GPC4-201ENST00000370828 ANKRD30BQ9BXX2 1392 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 TMPOP42166 694 aaKnown RBP14.92□□□□□ -0.02
GPC4-201ENST00000370828 SNX21Q969T3 373 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 JPH4Q96JJ6 628 aa14.92□□□□□ -0.02
GPC4-201ENST00000370828 GOLIM4O00461 696 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 WASHC4Q2M389 1173 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 U2AF2P26368 475 aaKnown RBP eCLIP14.91□□□□□ -0.02
GPC4-201ENST00000370828 ZNF165P49910 485 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 SNW1Q13573 536 aaKnown RBP14.91□□□□□ -0.02
GPC4-201ENST00000370828 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 TSC1Q92574 1164 aa14.91□□□□□ -0.02
GPC4-201ENST00000370828 ARID4AP29374 1257 aaPredicted RBP14.91□□□□□ -0.02
GPC4-201ENST00000370828 CRACR2AQ9BSW2 395 aa14.9□□□□□ -0.02
GPC4-201ENST00000370828 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
GPC4-201ENST00000370828 TFIP11Q9UBB9 837 aaKnown RBP14.9□□□□□ -0.02
GPC4-201ENST00000370828 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
GPC4-201ENST00000370828 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
GPC4-201ENST00000370828 OGFRQ9NZT2 677 aa14.9□□□□□ -0.02
GPC4-201ENST00000370828 LRRFIP2Q9Y608 721 aaKnown RBP14.9□□□□□ -0.02
GPC4-201ENST00000370828 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
GPC4-201ENST00000370828 SCAND2PQ9GZW5 306 aaPredicted RBP14.89□□□□□ -0.03
GPC4-201ENST00000370828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.89□□□□□ -0.03
GPC4-201ENST00000370828 CASQ1P31415 396 aa14.89□□□□□ -0.03
GPC4-201ENST00000370828 UBE2HP62256 183 aa14.89□□□□□ -0.03
GPC4-201ENST00000370828 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
GPC4-201ENST00000370828 ANO10Q9NW15 660 aa14.89□□□□□ -0.03
GPC4-201ENST00000370828 SMTNL1A8MU46 457 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 ZSCAN12O43309 604 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 NEMFO60524 1076 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 TXLNBQ8N3L3 684 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 TMX3Q96JJ7 454 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
GPC4-201ENST00000370828 ZSWIM4Q9H7M6 989 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 CCDC91Q7Z6B0 441 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 TNNQ9UQP3 1299 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 SHTN1A0MZ66 631 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 MNAT1P51948 309 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 SRCIN1Q9C0H9 1055 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 GBP3Q9H0R5 595 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 GOLGA6L10A6NI86 522 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 HIP1O00291 1037 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 STX6O43752 255 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 FEZ1Q99689 392 aa14.88□□□□□ -0.03
GPC4-201ENST00000370828 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
GPC4-201ENST00000370828 KIF4BQ2VIQ3 1234 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 ZBTB9Q96C00 473 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 JMYQ8N9B5 988 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 DDX58O95786 925 aaKnown RBP14.87□□□□□ -0.03
GPC4-201ENST00000370828 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 C10orf67Q8IYJ2 551 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
GPC4-201ENST00000370828 TMC6Q7Z403 805 aa14.87□□□□□ -0.03
GPC4-201ENST00000370828 CCDC181Q5TID7 509 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 VPS53Q5VIR6 699 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 PRPF40BQ6NWY9 871 aaKnown RBP14.86□□□□□ -0.03
GPC4-201ENST00000370828 FAM107BQ9H098 131 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 MX1P20591 662 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 ZNF428Q96B54 188 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 CNPY2Q9Y2B0 182 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 LIG1P18858 919 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 TERF1P54274 439 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 MYRIPQ8NFW9 859 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 SKILP12757 684 aa14.86□□□□□ -0.03
GPC4-201ENST00000370828 ZGPATQ8N5A5 531 aaKnown RBP14.86□□□□□ -0.03
GPC4-201ENST00000370828 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms