RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF2B-201ENST00000370500 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
GTF2B-201ENST00000370500 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
GTF2B-201ENST00000370500 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
GTF2B-201ENST00000370500 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
GTF2B-201ENST00000370500 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
GTF2B-201ENST00000370500 PLCH1Q4KWH8 1693 aa13.19□□□□□ -0.3
GTF2B-201ENST00000370500 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
GTF2B-201ENST00000370500 EVA1CP58658 441 aa13.18□□□□□ -0.3
GTF2B-201ENST00000370500 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
GTF2B-201ENST00000370500 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
GTF2B-201ENST00000370500 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
GTF2B-201ENST00000370500 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
GTF2B-201ENST00000370500 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
GTF2B-201ENST00000370500 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
GTF2B-201ENST00000370500 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
GTF2B-201ENST00000370500 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
GTF2B-201ENST00000370500 GLI3P10071 1580 aa13.17□□□□□ -0.3
GTF2B-201ENST00000370500 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
GTF2B-201ENST00000370500 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
GTF2B-201ENST00000370500 SLIT3O75094 1523 aa13.16□□□□□ -0.3
GTF2B-201ENST00000370500 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
GTF2B-201ENST00000370500 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
GTF2B-201ENST00000370500 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
GTF2B-201ENST00000370500 SOX12O15370 315 aa13.15□□□□□ -0.3
GTF2B-201ENST00000370500 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
GTF2B-201ENST00000370500 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
GTF2B-201ENST00000370500 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
GTF2B-201ENST00000370500 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
GTF2B-201ENST00000370500 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
GTF2B-201ENST00000370500 HOXB1P14653 301 aaPredicted RBP13.13□□□□□ -0.31
GTF2B-201ENST00000370500 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
GTF2B-201ENST00000370500 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
GTF2B-201ENST00000370500 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
GTF2B-201ENST00000370500 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
GTF2B-201ENST00000370500 PIK3C2AO00443 1686 aa13.13□□□□□ -0.31
GTF2B-201ENST00000370500 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
GTF2B-201ENST00000370500 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
GTF2B-201ENST00000370500 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
GTF2B-201ENST00000370500 A0A0G2JS52 829 aa13.11□□□□□ -0.31
GTF2B-201ENST00000370500 MYT1Q01538 1121 aa13.11□□□□□ -0.31
GTF2B-201ENST00000370500 NME9Q86XW9 330 aa13.11□□□□□ -0.31
GTF2B-201ENST00000370500 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
GTF2B-201ENST00000370500 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
GTF2B-201ENST00000370500 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
GTF2B-201ENST00000370500 LMO7Q8WWI1 1683 aa13.1□□□□□ -0.31
GTF2B-201ENST00000370500 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
GTF2B-201ENST00000370500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
GTF2B-201ENST00000370500 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
GTF2B-201ENST00000370500 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
GTF2B-201ENST00000370500 ABCC6O95255 1503 aa13.09□□□□□ -0.31
GTF2B-201ENST00000370500 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.31
GTF2B-201ENST00000370500 CRB1P82279 1406 aa13.08□□□□□ -0.31
GTF2B-201ENST00000370500 COG3Q96JB2 828 aa13.08□□□□□ -0.31
GTF2B-201ENST00000370500 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
GTF2B-201ENST00000370500 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
GTF2B-201ENST00000370500 RNF25Q96BH1 459 aaPredicted RBP13.07□□□□□ -0.32
GTF2B-201ENST00000370500 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
GTF2B-201ENST00000370500 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 ERBB3P21860 1342 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 NFAT5O94916 1531 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
GTF2B-201ENST00000370500 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
GTF2B-201ENST00000370500 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
GTF2B-201ENST00000370500 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
GTF2B-201ENST00000370500 FYB1O15117 783 aa13.06□□□□□ -0.32
GTF2B-201ENST00000370500 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
GTF2B-201ENST00000370500 CARD10Q9BWT7 1032 aa13.06□□□□□ -0.32
GTF2B-201ENST00000370500 COL18A1P39060 1754 aa13.05□□□□□ -0.32
GTF2B-201ENST00000370500 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
GTF2B-201ENST00000370500 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
GTF2B-201ENST00000370500 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
GTF2B-201ENST00000370500 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
GTF2B-201ENST00000370500 IP6K1Q92551 441 aa13.04□□□□□ -0.32
GTF2B-201ENST00000370500 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
GTF2B-201ENST00000370500 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
GTF2B-201ENST00000370500 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
GTF2B-201ENST00000370500 EP400Q96L91 3159 aa13.01□□□□□ -0.33
GTF2B-201ENST00000370500 DDB1Q16531 1140 aa13.01□□□□□ -0.33
GTF2B-201ENST00000370500 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
GTF2B-201ENST00000370500 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
GTF2B-201ENST00000370500 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
GTF2B-201ENST00000370500 KIF24Q5T7B8 1368 aa13□□□□□ -0.33
GTF2B-201ENST00000370500 BAG6P46379 1132 aa13□□□□□ -0.33
GTF2B-201ENST00000370500 AMPHP49418 695 aa13□□□□□ -0.33
GTF2B-201ENST00000370500 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
GTF2B-201ENST00000370500 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
GTF2B-201ENST00000370500 MAP3K19Q56UN5 1328 aa12.99□□□□□ -0.33
GTF2B-201ENST00000370500 EXOC5O00471 708 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms