RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
HIPK1-203ENST00000369553 CCDC66A2RUB6 948 aa12.86□□□□□ -0.35
HIPK1-203ENST00000369553 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
HIPK1-203ENST00000369553 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
HIPK1-203ENST00000369553 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
HIPK1-203ENST00000369553 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
HIPK1-203ENST00000369553 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■■■□□ 16.1
HIPK1-203ENST00000369553 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
HIPK1-203ENST00000369553 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
HIPK1-203ENST00000369553 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
HIPK1-203ENST00000369553 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 INSRP06213 1382 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 PRR36Q9H6K5 1346 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 NSD2O96028 1365 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
HIPK1-203ENST00000369553 ATP7BP35670 1465 aa12.83□□□□□ -0.35
HIPK1-203ENST00000369553 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.35
HIPK1-203ENST00000369553 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.35
HIPK1-203ENST00000369553 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.35
HIPK1-203ENST00000369553 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
HIPK1-203ENST00000369553 FYB1O15117 783 aa12.83□□□□□ -0.36
HIPK1-203ENST00000369553 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
HIPK1-203ENST00000369553 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
HIPK1-203ENST00000369553 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 GOLIM4O00461 696 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 NASPP49321 788 aaPredicted RBP12.82□□□□□ -0.36
HIPK1-203ENST00000369553 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
HIPK1-203ENST00000369553 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 ANKLE2Q86XL3 938 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
HIPK1-203ENST00000369553 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 MYCBPQ99417 103 aaPredicted RBP12.82□□□□□ -0.36
HIPK1-203ENST00000369553 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
HIPK1-203ENST00000369553 CEP83Q9Y592 693 aa12.82□□□□□ -0.36
HIPK1-203ENST00000369553 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
HIPK1-203ENST00000369553 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
HIPK1-203ENST00000369553 GTF2A1P52655 376 aaPredicted RBP12.81□□□□□ -0.36
HIPK1-203ENST00000369553 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
HIPK1-203ENST00000369553 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
HIPK1-203ENST00000369553 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 ERICH4A6NGS2 130 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 NBPF20Q3BBV1 942 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 CHD2O14647 1828 aaKnown RBP12.8□□□□□ -0.36
HIPK1-203ENST00000369553 KCNA6P17658 529 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 MTHFSP49914 203 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 HSP90AB3PQ58FF7 597 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
HIPK1-203ENST00000369553 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 TNNT1P13805 278 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
HIPK1-203ENST00000369553 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 PRDM16Q9HAZ2 1276 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 GPATCH11Q8N954 259 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 RSPH14Q9UHP6 348 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 USP19O94966 1318 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
HIPK1-203ENST00000369553 SATB1Q01826 763 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
HIPK1-203ENST00000369553 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
HIPK1-203ENST00000369553 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
HIPK1-203ENST00000369553 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
HIPK1-203ENST00000369553 CEP120Q8N960 986 aa12.78□□□□□ -0.36
HIPK1-203ENST00000369553 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
HIPK1-203ENST00000369553 CCDC172P0C7W6 258 aa12.77□□□□□ -0.36
HIPK1-203ENST00000369553 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
HIPK1-203ENST00000369553 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.37
HIPK1-203ENST00000369553 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
HIPK1-203ENST00000369553 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
HIPK1-203ENST00000369553 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
HIPK1-203ENST00000369553 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
HIPK1-203ENST00000369553 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
HIPK1-203ENST00000369553 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
HIPK1-203ENST00000369553 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
HIPK1-203ENST00000369553 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
HIPK1-203ENST00000369553 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
HIPK1-203ENST00000369553 NME9Q86XW9 330 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 FBLN1P23142 703 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 SGSM3Q96HU1 749 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 PLIN1O60240 522 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
HIPK1-203ENST00000369553 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
HIPK1-203ENST00000369553 COL3A1P02461 1466 aaPredicted RBP12.74□□□□□ -0.37
HIPK1-203ENST00000369553 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
HIPK1-203ENST00000369553 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
HIPK1-203ENST00000369553 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
HIPK1-203ENST00000369553 ACEP12821 1306 aa12.74□□□□□ -0.37
HIPK1-203ENST00000369553 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
HIPK1-203ENST00000369553 PSMD1Q99460 953 aa12.74□□□□□ -0.37
HIPK1-203ENST00000369553 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 DHX16O60231 1041 aaKnown RBP12.73□□□□□ -0.37
HIPK1-203ENST00000369553 SEC24BO95487 1268 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms