RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 ALDH3A1P30838 453 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 TRIM60Q495X7 471 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 PHLDB2Q86SQ0 1253 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 TSPYL2Q9H2G4 693 aaPredicted RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 LRRFIP2Q9Y608 721 aaKnown RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 KRT18P05783 430 aaKnown RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 C16orf45Q96MC5 204 aaPredicted RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 CACYBPQ9HB71 228 aaKnown RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 ROCK2O75116 1388 aaKnown RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 CBX1P83916 185 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
VANGL1-204ENST00000369510 UBXN4Q92575 508 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 HAUS8Q9BT25 410 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 TTC36A6NLP5 189 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 SATB1Q01826 763 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 SKIDA1Q1XH10 827 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 HVCN1Q96D96 273 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 ARHGAP25P42331 645 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 PDE3BQ13370 1112 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 MTUS1Q9ULD2 1270 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 VPS37DQ86XT2 251 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 TRIM63Q969Q1 353 aa10.12□□□□□ -0.79
VANGL1-204ENST00000369510 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 ZSCAN12O43309 604 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
VANGL1-204ENST00000369510 DAAM1Q9Y4D1 1078 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 ODF2LQ9ULJ1 636 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 NOC2LQ9Y3T9 749 aaKnown RBP10.11□□□□□ -0.79
VANGL1-204ENST00000369510 TRPC3Q13507 836 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
VANGL1-204ENST00000369510 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
VANGL1-204ENST00000369510 CGNQ9P2M7 1197 aaKnown RBP10.1□□□□□ -0.79
VANGL1-204ENST00000369510 SLC4A8Q2Y0W8 1093 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 CEP128Q6ZU80 1094 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 IPO4Q8TEX9 1081 aaKnown RBP10.1□□□□□ -0.79
VANGL1-204ENST00000369510 PKD2Q13563 968 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
VANGL1-204ENST00000369510 NGDNQ8NEJ9 315 aaKnown RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 CCDC18Q5T9S5 1454 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 A6NNZ2 444 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 CCDC192P0DO97 292 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 TUBB8Q3ZCM7 444 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 MIER3Q7Z3K6 550 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 APLFQ8IW19 511 aaPredicted RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 IQCGQ9H095 443 aaKnown RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 BCAP29Q9UHQ4 241 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 PDE4AP27815 886 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 NUF2Q9BZD4 464 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 MRPS9P82933 396 aaKnown RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 FOXD4L4Q8WXT5 416 aaPredicted RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 A0A1B0GW55 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 ACTN2P35609 894 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 NOP2P46087 812 aaKnown RBP10.09□□□□□ -0.79
VANGL1-204ENST00000369510 UBE4AQ14139 1066 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
VANGL1-204ENST00000369510 IRX4P78413 519 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 HIP1O00291 1037 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 LMNTD2Q8IXW0 634 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 NUP155O75694 1391 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 DHX57Q6P158 1386 aaKnown RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC155Q8N6L0 562 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 SNX16P57768 344 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 CASQ1P31415 396 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 RNF187Q5TA31 235 aaPredicted RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 SMARCC2Q8TAQ2 1214 aa10.08□□□□□ -0.8
VANGL1-204ENST00000369510 PAWRQ96IZ0 340 aaKnown RBP10.08□□□□□ -0.8
VANGL1-204ENST00000369510 SMTNL1A8MU46 457 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 RAP1GDS1P52306 607 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 PPP4R3AQ6IN85 833 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 GABPB2Q8TAK5 448 aaPredicted RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 ALS2CR12Q96Q35 445 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 TSPY26PQ9H489 355 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 SPA17Q15506 151 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms