RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
CCNC-203ENST00000369220 MARCH10Q8NA82 808 aaPredicted RBP13.85□□□□□ -0.19
CCNC-203ENST00000369220 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
CCNC-203ENST00000369220 EXOC5O00471 708 aa13.84□□□□□ -0.19
CCNC-203ENST00000369220 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
CCNC-203ENST00000369220 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
CCNC-203ENST00000369220 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCNC-203ENST00000369220 SHANK3Q9BYB0 1731 aa13.83□□□□□ -0.2
CCNC-203ENST00000369220 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
CCNC-203ENST00000369220 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
CCNC-203ENST00000369220 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
CCNC-203ENST00000369220 CYP27B1O15528 508 aa13.82□□□□□ -0.2
CCNC-203ENST00000369220 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
CCNC-203ENST00000369220 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
CCNC-203ENST00000369220 NUDCQ9Y266 331 aa13.81□□□□□ -0.2
CCNC-203ENST00000369220 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
CCNC-203ENST00000369220 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
CCNC-203ENST00000369220 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
CCNC-203ENST00000369220 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 TRIM37O94972 964 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
CCNC-203ENST00000369220 KCNQ2O43526 872 aa13.77□□□□□ -0.21
CCNC-203ENST00000369220 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
CCNC-203ENST00000369220 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
CCNC-203ENST00000369220 PHKG2P15735 406 aa13.76□□□□□ -0.21
CCNC-203ENST00000369220 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
CCNC-203ENST00000369220 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.216e-8■■■□□ 16.1
CCNC-203ENST00000369220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■□□□□ 10.7
CCNC-203ENST00000369220 ADAMTS8Q9UP79 889 aa13.76□□□□□ -0.21
CCNC-203ENST00000369220 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
CCNC-203ENST00000369220 FCHSD2O94868 740 aa13.75□□□□□ -0.21
CCNC-203ENST00000369220 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCNC-203ENST00000369220 PLEKHO1Q53GL0 409 aaPredicted RBP13.75□□□□□ -0.21
CCNC-203ENST00000369220 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
CCNC-203ENST00000369220 MIER1Q8N108 512 aa13.75□□□□□ -0.21
CCNC-203ENST00000369220 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
CCNC-203ENST00000369220 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
CCNC-203ENST00000369220 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 SOCS7O14512 581 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
CCNC-203ENST00000369220 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
CCNC-203ENST00000369220 BCL9O00512 1426 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
CCNC-203ENST00000369220 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
CCNC-203ENST00000369220 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
CCNC-203ENST00000369220 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
CCNC-203ENST00000369220 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
CCNC-203ENST00000369220 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
CCNC-203ENST00000369220 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
CCNC-203ENST00000369220 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.22
CCNC-203ENST00000369220 LGR6Q9HBX8 967 aa13.7□□□□□ -0.22
CCNC-203ENST00000369220 AKAP4Q5JQC9 854 aa13.7□□□□□ -0.22
CCNC-203ENST00000369220 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 BCL11BQ9C0K0 894 aaPredicted RBP13.69□□□□□ -0.22
CCNC-203ENST00000369220 RRP7AQ9Y3A4 280 aaKnown RBP13.69□□□□□ -0.22
CCNC-203ENST00000369220 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 APBA3O96018 575 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
CCNC-203ENST00000369220 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
CCNC-203ENST00000369220 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
CCNC-203ENST00000369220 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 MCM10Q7L590 875 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 PIGBQ92521 554 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 BTAF1O14981 1849 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 ITGB4P16144 1822 aa13.67□□□□□ -0.22
CCNC-203ENST00000369220 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
CCNC-203ENST00000369220 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
CCNC-203ENST00000369220 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
CCNC-203ENST00000369220 NEFMP07197 916 aa13.66□□□□□ -0.22
CCNC-203ENST00000369220 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
CCNC-203ENST00000369220 SF3B2Q13435 895 aaKnown RBP13.66□□□□□ -0.22
CCNC-203ENST00000369220 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
CCNC-203ENST00000369220 UTRNP46939 3433 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 APAF1O14727 1248 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
CCNC-203ENST00000369220 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
CCNC-203ENST00000369220 NFE2L2Q16236 605 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 SCN11AQ9UI33 1791 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
CCNC-203ENST00000369220 KCNQ4P56696 695 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
CCNC-203ENST00000369220 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 RIPK4P57078 832 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms