RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SHROOM2Q13796 1616 aa8.22□□□□□ -1.09
ECHDC1-204ENST00000368292 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-204ENST00000368292 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-204ENST00000368292 TRAF7Q6Q0C0 670 aa8.22□□□□□ -1.09
ECHDC1-204ENST00000368292 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
ECHDC1-204ENST00000368292 WDR97A6NE52 1622 aa8.21□□□□□ -1.09
ECHDC1-204ENST00000368292 ARID3CA6NKF2 412 aa8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 GIGYF1O75420 1035 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 NBPF20Q3BBV1 942 aa8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 PPRC1Q5VV67 1664 aaKnown RBP8.21□□□□□ -1.1
ECHDC1-204ENST00000368292 POM121CA8CG34 1229 aa8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 TRAK2O60296 914 aa8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 EIF5BO60841 1220 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 TIMP2P16035 220 aa8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 PROSER2Q86WR7 435 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
ECHDC1-204ENST00000368292 GRIN2BQ13224 1484 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 PBRM1Q86U86 1689 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 ALG2Q9H553 416 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 CEP126Q9P2H0 1117 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
ECHDC1-204ENST00000368292 AXIN1O15169 862 aa8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 PPP1R26Q5T8A7 1209 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 SOGA1O94964 1423 aa8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-204ENST00000368292 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 ADAMTS19Q8TE59 1207 aa8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
ECHDC1-204ENST00000368292 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 SOX11P35716 441 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 RAB15P59190 212 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 WWC1Q8IX03 1113 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 ZNF592Q92610 1267 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 ADCY10Q96PN6 1610 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 ARID3AQ99856 593 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
ECHDC1-204ENST00000368292 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-204ENST00000368292 TSGA10IPQ3SY00 556 aa8.15□□□□□ -1.1
ECHDC1-204ENST00000368292 NUP160Q12769 1436 aa8.14□□□□□ -1.11
ECHDC1-204ENST00000368292 SEMA3FQ13275 785 aa8.14□□□□□ -1.11
ECHDC1-204ENST00000368292 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
ECHDC1-204ENST00000368292 CHIC2Q9UKJ5 165 aa8.14□□□□□ -1.11
ECHDC1-204ENST00000368292 LILRA1O75019 489 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 HDGFL1Q5TGJ6 251 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 TRIM46Q7Z4K8 759 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 TOP2BQ02880 1626 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
ECHDC1-204ENST00000368292 ADD1P35611 737 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 CBLBQ13191 982 aa8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 Q6ZVU0 165 aa8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 NPM2Q86SE8 214 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 ATP13A2Q9NQ11 1180 aa8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
ECHDC1-204ENST00000368292 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 BMP1P13497 986 aa8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 CCDC125Q86Z20 511 aa8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 CDCA7Q9BWT1 371 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 ZNF777Q9ULD5 760 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-204ENST00000368292 POTECB2RU33 542 aa8.1□□□□□ -1.11
ECHDC1-204ENST00000368292 SCTRP47872 440 aa8.1□□□□□ -1.11
ECHDC1-204ENST00000368292 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
ECHDC1-204ENST00000368292 CCDC88BA6NC98 1476 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 GLMNQ92990 594 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 UCN2Q96RP3 112 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 CYLDQ9NQC7 956 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 PCDHB11Q9Y5F2 797 aa8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-204ENST00000368292 ABCA5Q8WWZ7 1642 aa8.08□□□□□ -1.12
ECHDC1-204ENST00000368292 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-204ENST00000368292 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-204ENST00000368292 PRG4Q92954 1404 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-204ENST00000368292 AGBL1Q96MI9 1066 aa8.07□□□□□ -1.12
ECHDC1-204ENST00000368292 ADAMTS12P58397 1594 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 PLPP7Q8NBV4 271 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 NFATC2IPQ8NCF5 419 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
ECHDC1-204ENST00000368292 DOLKQ9UPQ8 538 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms